Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0479 ATGGGAGATTCAGAGCATCAGAGGAATGTCAATCTTCCTCCTGGGTTTCGCTTCTATCCTTCGGATGAAGAGCTCGTTGTTCACTTCCTTCAGAGAAAAGCTTCCCTCCTGCCTTTCCACCCAGATGTCATCCCTGATCTTGACCTCTTCCCCTACGATCCTTGGGACCTTCATGGTAAGGCTTTGGGAGAAGGGAATCAATGGTACTACTTCAGCAGAAGAACACAGAATAGAGTGACCAATAATGGGTATTGGAAAGCAATGGGAATGGAAGAGCCAATAGTTACAAGCTCAAATAGTAAAATTGTTGGAGTCAAGAAATATTTCATCTTCTTCATGGGAGAATCTCCTTCTGGTATCAAAACCAATTGGGTAATGCAAGAGTATCGTCTCTCAGATTCTTCCTCCTCCTCCTCTTCCTCTTCCTCTTCTTCTAGCAGATCATCCAAGAGAAAATCCAAAACAGATTACTGTAAATGGGTGATTTGTCGAGTTTACGAGCGTGACGACGATGATAACGATGGAGGAGCTGAACTCTCTTGTTTGGATGAAGTTTTCTTGTCACTAGATGATCTTGATGAAATCAGCCTTCCTAATTAG 600 0.43 MGDSEHQRNVNLPPGFRFYPSDEELVVHFLQRKASLLPFHPDVIPDLDLFPYDPWDLHGKALGEGNQWYYFSRRTQNRVTNNGYWKAMGMEEPIVTSSNSKIVGVKKYFIFFMGESPSGIKTNWVMQEYRLSDSSSSSSSSSSSSSRSSKRKSKTDYCKWVICRVYERDDDDNDGGAELSCLDEVFLSLDDLDEISLPN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0479 199 MobiDBLite consensus disorder prediction 133 155 - -
Acco03g0479 199 Pfam No apical meristem (NAM) protein 13 131 IPR003441 GO:0003677|GO:0006355
Acco03g0479 199 FunFam NAC domain-containing protein 104 21 171 - -
Acco03g0479 199 PANTHER NAC TRANSCRIPTION FACTOR 56 12 172 - -
Acco03g0479 199 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Acco03g0479 199 ProSiteProfiles NAC domain profile. 12 168 IPR003441 GO:0003677|GO:0006355
Acco03g0479 199 MobiDBLite consensus disorder prediction 133 148 - -
Acco03g0479 199 Gene3D NAC domain 21 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0479 Acco-ChrAcco03 6330453 6331629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0479 1 169 NAC Transcription Factor Family AT1G61110 43.258 4.16e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco03g0479 NAM 5.7e-29 No_clan