Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0464 ATGGAGAAGATTTGGCATCACACATTTTACAATGAGCTTCGTGTTGCTCCTGAAGAGCACCCAGTACTTCTTACTGAGGCACCACTCAATCCCAAGGCTAACAGAGAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTGCCTGCTATGTATGTCGCTATCCAGGCCGTCTTGTCTCTCTATGCTAGTGGACGTACAACAGGTATTGTGCTTGATTCTGGTGATGGTGTGAGCCACACGGTACCCATATATGAAGGGTATGCTCTCCCTCATGCGATTCTTCGGTTGGACCTTGCTGGTCGTGATTTAACTGAGTACTTGATGAAAATTCTTACGGAGAGAGGTTACTCTTTCACCACCTCTGCCGAACGGGAAATTGTACGTGATGTGAAGGAGAAATTAGCATATGTCGCCCTCGATTTTGAACAAGAATTGGAGACTGCTAAGAGTAGTTCGGCAGTGGAGAAGAGTTATGAATTGCCTGATGGACAAGTCATTACCATAGGGGCTGAGAGGTTCCGATGCCCAGAAGTACTCTTCCAACCATCACTAATTGGTATGGAGGCTACTGGAATCCATGAAACTACATACAACTCCATCATGAAATGTGATGTTGATATTAGGAAGGATCTGTATGGAAATATTGTGCTCAGTGGTGGTTCAACCATGTTCCCTGGAATCGCCGATCGTATGAGCAAGGAAATCACTGCTCTTGCTCCAAGCAGCATGAAAATCAAGGTGGTCGCACCTCCTGAGAGGAAGTACAGTGTTTGGATTGGTGGATCTATCTTGGCATCACTCAGCACTTTCCAACAGATGTGGATCTCAAAGGGTGAGTATGATGAATCTGGTCCAGCTATTGTCCACAGGAAGTGCTTCTAA 885 0.4531 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLMKILTERGYSFTTSAEREIVRDVKEKLAYVALDFEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEATGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0464 294 FunFam Major actin 177 257 - -
Acco03g0464 294 Gene3D Actin; Chain A, domain 4 99 190 - -
Acco03g0464 294 ProSitePatterns Actins signature 2. 275 283 IPR004001 -
Acco03g0464 294 Gene3D - 1 288 - -
Acco03g0464 294 FunFam Actin, muscle 99 190 - -
Acco03g0464 294 PANTHER ACTIN 1 287 IPR004000 -
Acco03g0464 294 FunFam Putative actin-related protein 5 258 286 - -
Acco03g0464 294 PRINTS Actin signature 59 78 IPR004000 -
Acco03g0464 294 PRINTS Actin signature 155 171 IPR004000 -
Acco03g0464 294 PRINTS Actin signature 34 47 IPR004000 -
Acco03g0464 294 PRINTS Actin signature 3 21 IPR004000 -
Acco03g0464 294 Pfam Actin 1 294 IPR004000 -
Acco03g0464 294 SUPERFAMILY Actin-like ATPase domain 1 72 IPR043129 -
Acco03g0464 294 CDD NBD_sugar-kinase_HSP70_actin 1 100 - -
Acco03g0464 294 SMART actin_3 1 294 IPR004000 -
Acco03g0464 294 FunFam Actin, alpha skeletal muscle 56 115 - -
Acco03g0464 294 Gene3D - 57 257 - -
Acco03g0464 294 FunFam Actin 12 33 55 - -
Acco03g0464 294 SUPERFAMILY Actin-like ATPase domain 66 294 IPR043129 -
Acco03g0464 294 ProSitePatterns Actins and actin-related proteins signature. 23 35 IPR020902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0464 Acco-ChrAcco03 6044469 6045647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0464 1 294 Cytoskeleton Gene Families AT5G09810 96.259 0.0 590