LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco03g0457	ATGGATAGGTTACTAAGCAATAGAGATAGCGTGAGGGATGGTGTGAAGGGAACATTATTAATGCTGATAGTTCAGATTGTGTATGCAGTGGCGAATATATTGTTGAAAATGGCAGCAAATGATGGAATGAGCTTGACTGTTCTTGTTGCCTACAGATTCCTCTTATCAACCTCCTTCCTTGCTCCTCTTGCCCTATTCTTTGAAAGGGACAGCCTCCAAAATGTTGATGGCATAGTTCTATTCCATGCTTTTCTTTGTGGCTTATTTGGGGGATCTTTATTACATAATCTCTATGCCCAATCCTTGGCCTTGGTATCCGTAACATATGTCACAGCTATGTTGAACCTTGTTCCAGCCACTACCTTCATCTTGGCTGTCTTATTTAGATTGGAGAGGATGAATTTTAGGACAACAAGAGGGAAGGCCAAGGTATTAGGGACATTGACAGGAATCAGTGGAGCCATGATCCTTACTTTCTGCAAAGGCAGAAGAATCCAAATCTGGACGGCTCATATTGACCTGCCAAGCCACGTGACATTATCACATGCCTCCTCCACTGCCTCTTCTCGCTTGTGGGGCTGCCTACTTGCTCTTGCCACGTGCCTCAGTTACTCGTTGTGGTTGATCATCCAGGGGAAGATGACGCAGAGATTTCCATGGCAGCACTCAAGCACAGCTTTAACGTGCGCAATGAGCTCATTCCAATCTCTTGTGGCTGCACTTTGCATTGAGAGAGATAATTGGAATGAATGGAAGCTTGGCTGGAACATCAGGCTCCTCACTGTGGCTTTTACAGGGATATTGACGTCAGGGGTGGCTTATATCCTAATAGCATGGTGTGTGATGAAGAAGGGACCATTGTTTGTGGCCATTTTCAATCCTGTAATGCTTGTGATCGTCACCCTTGGAGGTTCTTTCATACTTGACGAGCCTCTCTATGTTGGAAGTGTGATAGGGATGGCGTTGGTGGTTTTTGGATTGTACATGGTGTTGTGGGGGAAGAGTAAGGAAACAAACAAAGAGGCACCATCAGAGCAATCGAGAGACTCTCTTCCAAGCGATGATGATCAGTCCATCCAAATTTGTGATAAACAACTTCATATCGATTCCATTTCTATGGAAAAATCCAATAATTTGGTTCAGTCTAATCTAACCTAA	1158	0.4413	MDRLLSNRDSVRDGVKGTLLMLIVQIVYAVANILLKMAANDGMSLTVLVAYRFLLSTSFLAPLALFFERDSLQNVDGIVLFHAFLCGLFGGSLLHNLYAQSLALVSVTYVTAMLNLVPATTFILAVLFRLERMNFRTTRGKAKVLGTLTGISGAMILTFCKGRRIQIWTAHIDLPSHVTLSHASSTASSRLWGCLLALATCLSYSLWLIIQGKMTQRFPWQHSSTALTCAMSSFQSLVAALCIERDNWNEWKLGWNIRLLTVAFTGILTSGVAYILIAWCVMKKGPLFVAIFNPVMLVIVTLGGSFILDEPLYVGSVIGMALVVFGLYMVLWGKSKETNKEAPSEQSRDSLPSDDDQSIQICDKQLHIDSISMEKSNNLVQSNLT	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco03g0457	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	51	159	-	-
	Acco03g0457	385	Pfam	EamA-like transporter family	16	157	IPR000620	GO:0016020
	Acco03g0457	385	Pfam	EamA-like transporter family	191	331	IPR000620	GO:0016020
	Acco03g0457	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	236	336	-	-
	Acco03g0457	385	PANTHER	WAT1-RELATED PROTEIN	19	344	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco03g0457	Acco-ChrAcco03	5867529	5873220	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco03g0457	15	372	Nodulin-like Gene Family	AT1G25270	37.430	2.11e-79	246