LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco03g0450	ATGGCGTCGTCGAAGTTGGTCACGACGAATCCGGATCTGCCACGCCAATCTTCTATTTGTTCCCTTTCTTCTATTCTCGCTGATCTCCAGAACAACACTAACAACGCCAACATCAACACCAATAACACCAACAACCACAACGAATCAAACGCCGGCGCCGACGACCCTTCCAAGGCCTTGGGTTCTATGAGCATGGACGATCTCTTCAAGTCCATTTACTCTTCTTCTTCATCTGATCCCAATAACAATCCCAACCCGGCGCACCTCACGACGGACCCCAATTTCCACCCCGCTGCGGCAGAATTGGGCACCAGGACGGGGGAGGAGATGTGGCAGGAAATGGTGGAGGGTGGTGATCAGAGGCGGATGGGTGCAGGGGAGGGTTTGGAGGCCATGACTTTGGAAGATTTCTTGGCCAAGGCTGGCGCTGTAAGAGAGGAAGATGTAAGAGGGGTTCCTACCGTAGTACCTGGCCATGCAAGTTTCCGCGTGGATGCAGCGGCGGCGGCAACCATCAACGGTGGCGCTCAGTTCTCGATGCCGCCGTCGGTTCAAGTTAAGGAAGGGTCGTCCATGGAAGTTTTTGGAAATGGGACTGACGGGACAGTAGTGGGAGTTGCAGCATCAGCGGGAAGAGGGAAGCGGAGGATTGTGGATGTACCTGTTGATAAGGCTACGCTTCAGAAGCAGAGAAGGATGATAAAAAACAGAGAGTCTGCAGCCAGGTCCAGAGAACGCAAGCAGGCTTACACTGTCGAACTGGAGACTATGGTAACACAGCTGGAGGCTGAGAATGCACAACTATTGAGAGAAATGGCTGAAAAGAAGAAGCAGAGGTACAAGCAGCTCATGGAAAACCTTATTCCTGTGGTGGAGGAGCGTAGATCACAACGAAAGATTCGGAGGGTGAATTCAGCCCAGTGGTGA	927	0.5264	MASSKLVTTNPDLPRQSSICSLSSILADLQNNTNNANINTNNTNNHNESNAGADDPSKALGSMSMDDLFKSIYSSSSSDPNNNPNPAHLTTDPNFHPAAAELGTRTGEEMWQEMVEGGDQRRMGAGEGLEAMTLEDFLAKAGAVREEDVRGVPTVVPGHASFRVDAAAAATINGGAQFSMPPSVQVKEGSSMEVFGNGTDGTVVGVAASAGRGKRRIVDVPVDKATLQKQRRMIKNRESAARSRERKQAYTVELETMVTQLEAENAQLLREMAEKKKQRYKQLMENLIPVVEERRSQRKIRRVNSAQW	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco03g0450	308	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	231	246	IPR004827	GO:0003700\|GO:0006355
	Acco03g0450	308	CDD	bZIP_plant_BZIP46	228	270	-	-
	Acco03g0450	308	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	226	278	IPR004827	GO:0003700\|GO:0006355
	Acco03g0450	308	SMART	brlzneu	224	288	IPR004827	GO:0003700\|GO:0006355
	Acco03g0450	308	SUPERFAMILY	Leucine zipper domain	228	278	IPR046347	GO:0003700\|GO:0006355
	Acco03g0450	308	Pfam	bZIP transcription factor	225	286	IPR004827	GO:0003700\|GO:0006355
	Acco03g0450	308	Coils	Coil	251	286	-	-
	Acco03g0450	308	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	15	294	IPR043452	GO:0003700\|GO:0045893
	Acco03g0450	308	MobiDBLite	consensus disorder prediction	68	90	-	-
	Acco03g0450	308	MobiDBLite	consensus disorder prediction	36	99	-	-
	Acco03g0450	308	MobiDBLite	consensus disorder prediction	36	52	-	-
	Acco03g0450	308	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	227	283	-	-
	Acco03g0450	308	Gene3D	-	228	285	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco03g0450	Acco-ChrAcco03	5807916	5811855	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco03g0450	105	308	bZIP Transcription Factor Family	AT5G44080	46.698	2.11e-42	147

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Acco03g0450		bZIP_1	8.9e-15	CL0018