Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0444 ATGAGAAGAGAGAAAGGAGAAGAAGTTGCAGAGATGGGAATTGATCTCTCTTTGAAGATTGATGCGAAACAAAAAGAGAGAGAAGAGGAGAGAGAAAGAATAATATTATTTGATGATGATGATGAGAAGGGAAAGAAGGATAATAAAGAAGAAGCAACTGAGCAGGTCACAGAAGGTGAAATTGAAGAAGACGATGCATCAGTTGAACAAAACTTGGCTTCCAGCCCAAAGGAGCTAAGGGGGTTAAAAATGGAGATGGATCGTATGAAAGAGGAAAACAAAGTGTTGAGGAGAGTAGTGGAGCAAACCATGAAAGACTATTACGATCTCCAATTCAAATTCGCAGCCATCCATAATAATCCTCTCAACAACAATAATATTAAGCTCATGAACAAGGATCCTCAAATATGTCTCTCACTTCAAGGCAATAATAATAATAATATGGCAAACACGAGCACGATGAGAAGTGAAGAAGAAGGACCACCACCAGCACCGACAAACACTGATATTAGTGAGAATGATTTGGGATTGTCACTGAGTTTGCACACTACTAGTCGTGCATCAGAAGATGAAGATGATGGAGGCAATTTTAATAATAATAATCACAAACAAGATTTGGCTTCTTCTTCTAAGTTGAATCGGATTCATCATCAACAACAACTTGTCGCTGCGTCGTCTCCTCCACATAGAAAGGCTAGGGTTTGTGTTAGAGCAAGATGTGACACTGCCACTATGAATGATGGGTGCCAGTGGAGAAAATATGGGCAAAAGGTTGCTAAAGGAAATCCATGTCCTCGTGCTTATTATCGATGTACCGTATCTCCTGGATGCCCTGTAAGAAAACAGGTACAAAGATGTATAGAGGACATGTCAATCCTAATAACAACGTATGAAGGAACACATAATCATCCTCTACCTGTAGGAGCAACAGCCATGGCTTCTACTGCTTCCACGTCAGCTGCATCCTTCATGTTACTTCACTCTTCTTCTTCATCACAACCCTCCACCATTATTCCTACCTCTGCTTCTTCTTCTTCCTCCTCCTCTACTTTCATCCCTTTCAGTAACAACACTACTAGTTATATCAGAACCCTAAACCCTAATAATACTGATCTTCCTCCTTCTAAACGTGCCCTTTTCTTTGATCTCACAAACAAAACTGCATTTCCCTAG 1173 0.4032 MRREKGEEVAEMGIDLSLKIDAKQKEREEERERIILFDDDDEKGKKDNKEEATEQVTEGEIEEDDASVEQNLASSPKELRGLKMEMDRMKEENKVLRRVVEQTMKDYYDLQFKFAAIHNNPLNNNNIKLMNKDPQICLSLQGNNNNNMANTSTMRSEEEGPPPAPTNTDISENDLGLSLSLHTTSRASEDEDDGGNFNNNNHKQDLASSSKLNRIHHQQQLVAASSPPHRKARVCVRARCDTATMNDGCQWRKYGQKVAKGNPCPRAYYRCTVSPGCPVRKQVQRCIEDMSILITTYEGTHNHPLPVGATAMASTASTSAASFMLLHSSSSSQPSTIIPTSASSSSSSSTFIPFSNNTTSYIRTLNPNNTDLPPSKRALFFDLTNKTAFP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0444 390 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0444 390 MobiDBLite consensus disorder prediction 140 205 - -
Acco03g0444 390 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 360 IPR044810 GO:0003700
Acco03g0444 390 Coils Coil 79 106 - -
Acco03g0444 390 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0444 390 MobiDBLite consensus disorder prediction 1 77 - -
Acco03g0444 390 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0444 390 MobiDBLite consensus disorder prediction 1 55 - -
Acco03g0444 390 MobiDBLite consensus disorder prediction 140 157 - -
Acco03g0444 390 FunFam probable WRKY transcription factor 31 230 307 - -
Acco03g0444 390 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0444 390 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0444 390 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0444 Acco-ChrAcco03 5600207 5603039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0444 12 373 WRKY Transcription Factor Family AT1G68150 43.915 4.17e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g0444 WRKY 1.6e-24 CL0274