Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0443 ATGCAATCTGCCAAACAAGAAGCTCTCTACTCTCACTCCAGCCGTCTCTCCGATGCTGTTCCTGGTTTTCGCTTCCAAGCTCACGTCTCCTTCGTAATCATTCACAGCTTCAACAAAATGGACGCCTCCAAGCGCAAGCGTTTGAAGCCCAGGCTCGAGCGCCGAAACGCCAGGAAGAACATCGATTATCAAGTTCCTGATTCCTTAGCTTCCTCTTTCGAAGGTTCCTCCTCGCCGGATTTTCAATCTTCCTCGTCCCTCGATCTTTCCCCTTCCCTTGAGAAACAAACCAGCATTCGTGTTCAGGGCGTCGAGGGTGAATTCGAATTGATTTTCCGCAGCCTCGGGCTTTCTGGCCCGGACGATTTCTCCATTCCTGTTGAAGATTGGGAAGCCCAAAGGCATCGCTATAGTTTGAGTGCTAAATCGCCCGAAAAGAAGGTGAATGATGAGAAATCGGTGAAACTTGAATCTAGGGTTTCGATTAAAAGGGATATTGAAGTGCCTCGTGATGAAGGGCAGCTCGGGAAGAGTTTTTCTCCTTCTGATTCGAAGCCTCTTGGGGGTGGCGGAATCAAGGGTGCCAGGCCTCCCGTCCTCTCAACGCCGCCAGTGAAGCTGCCGCCTATGGTTGATGACGGTAAATCTACTTGGGATTTAGTCAAGTCTTTATCAGATGGGGTTATTGATAATGATTCACCCATTCGTGATGGGGAAATCAGTTCTCCCGGTGTAGAAAACGAAGGGCGTGACCGGGAAAATGAACGTTGTGATCAAGGAATTTGTGTTGAGGAAGGACCACATAGTGCGAGACATGGGGAAAGCAATCTTCCTTCAGATTCTTGTTCATCTACGTCCCGCGAGGACGAAGAAAGTGATCCCGTTGGATTTAAGGTTTCTGGTGAGGCTGATGAATCGTTTTACAGTGTCTCTCCACATGGTTCATTTAGACGCATTTTTAAGTCTTGGCAAAAGGGTGAGATTTTGGGGAAGGGATCATTTGGAACGGTGTATGAAGGCTTCACAGATGATGGATACTTTTTTGCTGTAAAGGAAGTGTCTTTGCTAGATCAAGGAGCCCAAGGAAAACAGAGTATTTTCCAACTTCAGCAGGAAATATATCTTTTGAGTCAATTTGAACATGAGAACATTGTTCGATATCTTGGCACTGACAAGGATAAAAATATGCTATACATTTTCCTTGAGCTTGTAACCAAAGGGTCATTGGCAAGACTCTATCAAAAGTATCGTCTAAAGGACTCTCAAGTGTCTTCATACACGCGGCAGATTTTAAGGGGTTTAAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGCGCTAATATATTGGTTGATACAAATGGGTCAGTTAAGCTCGCTGATTTTGGGTTAGCCAAGGCAACCACTATGAATGATGTTAAATCAAGCAAAGGTTCCCCTTATTGGATGGCCCCTGAGGTTGTAAATCTAAGAAACCGTGGTTATGGCCTAGCTGCTGATATATGGAGCTTGGGATGCACAGTTTTGGAAATGTTGACGCGCCAGCCTCCTTACTCTCATTTGGAAGGGATGCAAGCTTTATTTCGGATTGGCAGAGGTGAACCCCCACCTGTTCCAGAATCTTTATCACAAGATGCCCGGGATTTCATTCTCAAGTGCCTGCATGTTGACCCTAATAAAAGGCCAACTGCAGTCCAGTTATTGGATCATCCATTTTTAAAGAGGCCATTTCTATCTCCGTGA 1752 0.4566 MQSAKQEALYSHSSRLSDAVPGFRFQAHVSFVIIHSFNKMDASKRKRLKPRLERRNARKNIDYQVPDSLASSFEGSSSPDFQSSSSLDLSPSLEKQTSIRVQGVEGEFELIFRSLGLSGPDDFSIPVEDWEAQRHRYSLSAKSPEKKVNDEKSVKLESRVSIKRDIEVPRDEGQLGKSFSPSDSKPLGGGGIKGARPPVLSTPPVKLPPMVDDGKSTWDLVKSLSDGVIDNDSPIRDGEISSPGVENEGRDRENERCDQGICVEEGPHSARHGESNLPSDSCSSTSREDEESDPVGFKVSGEADESFYSVSPHGSFRRIFKSWQKGEILGKGSFGTVYEGFTDDGYFFAVKEVSLLDQGAQGKQSIFQLQQEIYLLSQFEHENIVRYLGTDKDKNMLYIFLELVTKGSLARLYQKYRLKDSQVSSYTRQILRGLKYLHDRNVVHRDIKCANILVDTNGSVKLADFGLAKATTMNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEPPPVPESLSQDARDFILKCLHVDPNKRPTAVQLLDHPFLKRPFLSP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0443 583 FunFam Mitogen-activated protein kinase 1, putative, expressed 321 583 - -
Acco03g0443 583 MobiDBLite consensus disorder prediction 165 211 - -
Acco03g0443 583 MobiDBLite consensus disorder prediction 243 271 - -
Acco03g0443 583 Gene3D Transferase(Phosphotransferase) domain 1 321 582 - -
Acco03g0443 583 SUPERFAMILY Protein kinase-like (PK-like) 310 578 IPR011009 -
Acco03g0443 583 SMART serkin_6 323 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0443 583 MobiDBLite consensus disorder prediction 284 298 - -
Acco03g0443 583 MobiDBLite consensus disorder prediction 226 298 - -
Acco03g0443 583 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Acco03g0443 583 ProSiteProfiles Protein kinase domain profile. 323 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0443 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Acco03g0443 583 MobiDBLite consensus disorder prediction 69 89 - -
Acco03g0443 583 Pfam Protein kinase domain 324 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0443 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 62 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0443 Acco-ChrAcco03 5573565 5577573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0443 192 580 MAP Kinase Kinase Kinase AT4G08500 54.872 1.96e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g0443 Pkinase 5.1e-72 CL0016