Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0430 ATGGATATGAGAGGTCGTCCTCGCGCTATCGTCAATGGCGTTAGAAGAACCAGAACCTTCCACTACTTCTGGTGCCAAAATTGCCAGCGCGTTATCAGAATACCCTCCTCTGCAAACCCTAATTTCTCTGTTTGCCCCTTTTGCTCCCATCAATTACTCCTCGAACTCGATATCGCGACGCCCAGTCTTCTCATGAATAATCCTCCTAATTTACAGCCTTCCCCTGTTTCTCAATTGATCAACGGATTGGCTCTCATTCTAGATCCATCGAGGAGAGAGCGAAGCACTCGATTGGATCAAAATCGAAATGTTCAATGGATTGAAGAAACCGAAGAAGGACCGAATTCTCAGAACTGGATCACTCTCCGATTTGTGAGACCAATTCCTCCACAAAGACAAATTCCGGGAGCCAACGACGAAAACAGGGCACCTCCGGCGGCCAATTCGGCCATCGAAGGGTTGCCGACGGTGCAATTGACGGAAACACAATTAGCGAGTGATCCGAATTGCGCGATTTGCAAAGACGAGTTTGAGATTGATATGGAAGTGAAAGAGTTACCTTGCAAGCATTTCTATCATTCGGATTGTATTATTCCTTGGCTTCGAATTCACAATACGTGTCCTATCTGCCGCCATGAGCTGCGAAGCGCTTCATCATCATCATCGTCTTCTTCTTATTATTCCAATTTCCCTGAAGATTTCCCACATTTTGATTTTCGATATGGATTTGGGTTTGATGATGCTTCACACGGCTTGAATTGGCTTTGGAGCCAGCTTGCCTCTCTTCGACCTGTTCGTGCGGTTATGGAATGGACTCGGCGATATTTGTTTGCTGATTTCCATGAAAATCGTGAACGACAAGGAGGAGGTAAGTTTCTGTAA 882 0.458 MDMRGRPRAIVNGVRRTRTFHYFWCQNCQRVIRIPSSANPNFSVCPFCSHQLLLELDIATPSLLMNNPPNLQPSPVSQLINGLALILDPSRRERSTRLDQNRNVQWIEETEEGPNSQNWITLRFVRPIPPQRQIPGANDENRAPPAANSAIEGLPTVQLTETQLASDPNCAICKDEFEIDMEVKELPCKHFYHSDCIIPWLRIHNTCPICRHELRSASSSSSSSSYYSNFPEDFPHFDFRYGFGFDDASHGLNWLWSQLASLRPVRAVMEWTRRYLFADFHENRERQGGGKFL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0430 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 103 214 - -
Acco03g0430 293 SUPERFAMILY RING/U-box 150 216 - -
Acco03g0430 293 CDD RING-H2_RNF126-like 169 211 - -
Acco03g0430 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 217 IPR013083 -
Acco03g0430 293 ProSiteProfiles Zinc finger RING-type profile. 170 211 IPR001841 -
Acco03g0430 293 FunFam E3 ubiquitin-protein ligase RING1-like 134 217 - -
Acco03g0430 293 Pfam Ring finger domain 169 211 IPR001841 -
Acco03g0430 293 SMART ring_2 170 210 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0430 Acco-ChrAcco03 5416509 5417390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0430 6 272 C3H Transcription Factor Family AT1G68180 36.059 3.35e-41 140