Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0407 ATGAAGATCTCCGTGGTTCTTCTCTTTCTCTTCTTCTCCATATTTCTTACTCTCAGCTCTGCAGTTCCTTCGTCTTCTTCACCCTCTGTTAAGAATTCCACCTGCCCTGTGGATCTGGACTATGTGCGGAGAATTCCATGGAACTCCTCCGTATGCCAAAACTTTCATCCTTTGGATTCCGTAGACGACACTCGAGGAACCCATTGTTGCGGAACTTTACTATCCCTAATTGGCATAGGGTTTGCTCGGCATCTCAAAGAAACCTCCATGTTTAACCTCCAAGATCTTCGAACCTCCAATTCTTGCCTCCGTGACTTCCAATCCAAGCTCTCTTCCCTCTCTCTCCCCGATTACCTAACCTCGGTTTGTTTCGACCCGCTTCAATTTGTGGTTAGTCATGACGTCTGCGCGAAAATTCAAAGGATTCCTGATTGGATCGCGAAGCTCGGACAAACGACGCCGCTTAATCAGGCATGCAAACCGGACCTGACTGATCTTACCCTATGTGGTGCGTGCCTGGCGGCGGGGTTTCAGGTTCAGCAGGAACTCACAGACATTGATGGTAACCCTTCCCACGGTACAAATTGTTTTCGCTTTGTTATTTTGTATGCCGCTGGTATCGTGAATGAGCTTGGTCCAGAGAGTAATGGTGCTGTGACATGCATTTTTGGCATGTCGGTTTATCCAACTGTGGATTCTAGTGGAAATGGTCGCCATCAAGCTCTTGTGTTTGGGTTAACCGGAGCTGCGGTTGGGTTGTTGGCCATGTTCGTTTTGTTGGGTCTGTATCTATGGTATGATAGGAGGTGGAGGAGGGGAAAACATGAGAGTTTTGGGTTTGATGTTGATCCTGAAGAGCAGGGATCCAGGCGTAGAATGAGGCCGAATACTGGATCAATCTGGTTTAAGATTGAGGAGCTTGAGAAGGCTACTAATGGTTTTTCATCTAAAAATTTCATAGGAAGAGGTGGATTTGGGATGGTTTACAAGGGAACTTTGGCTGATGGATCTGTGGTCGCAGTTAAAAGGATTTTGGAATCTGATTATCAAGGGGATGCTGAGTTCTGCAATGAAGTAGAGATTATTAGTAATCTGAAGCACCGTAATCTGGTACCACTTAGAGGGTGTTGTGTGGTGGACGAGGGTGAGAATTATGAGGAAAGGGGTCAAAGATATCTTGTTTATGACTACATGCCAAATGGTAATCTCGAAGACCATCTTTTCTCATCATCAGTGGGCAATCAAAATGAGAAGAGATCATTGACTTGGCCACAGAGAAAAAGCATAATCTTGGATGTAGCAAATGGATTGGCTTACTTGCATTATGGAGTTAAGCCTTCGATTTATCACAGAGACATCAAGGCCACCAATATACTACTCGGCGCAGATATGAGGGCGAGAGTGGCAGATTTTGGGCTTGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTTGCTGGAACTCATGGATATCTAGCCCCAGAGTATGCGCTATACGGTCAGCTTACTGAGAAAAGTGATGTCTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGACTTGTCTTCATCAGGATCTCCAAGGGCATTCTTGATCACAGATTGGGCGTGGTCCTTGGTTAAATCTGGGAACATAGACGAGGCTTTAGACGCTTCCCTTTTAAAAGATGGCGATTGTCCTAGTTCAAATCCTAAGAGCATAATGGAAAGGTTTTTGCTTGTGGGGATTCTGTGTTCTCACGTGATGGTTGCTTTGAGGCCAACGATTTCTGAAGCTTTGAAGATGTTGGAAGGTGATGTCGAAGTCCCAGAAATCCCAGACCGGCCTTTGCCTCTTGGGCATCCTTCATTTTACAATGATGGTAACAATACTTTTAGCATATCTCCAGTATTAAGCGGCCCAAAATTGCATAGTGGAGACATGCTCAGGTAA 1959 0.4533 MKISVVLLFLFFSIFLTLSSAVPSSSSPSVKNSTCPVDLDYVRRIPWNSSVCQNFHPLDSVDDTRGTHCCGTLLSLIGIGFARHLKETSMFNLQDLRTSNSCLRDFQSKLSSLSLPDYLTSVCFDPLQFVVSHDVCAKIQRIPDWIAKLGQTTPLNQACKPDLTDLTLCGACLAAGFQVQQELTDIDGNPSHGTNCFRFVILYAAGIVNELGPESNGAVTCIFGMSVYPTVDSSGNGRHQALVFGLTGAAVGLLAMFVLLGLYLWYDRRWRRGKHESFGFDVDPEEQGSRRRMRPNTGSIWFKIEELEKATNGFSSKNFIGRGGFGMVYKGTLADGSVVAVKRILESDYQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDEGENYEERGQRYLVYDYMPNGNLEDHLFSSSVGNQNEKRSLTWPQRKSIILDVANGLAYLHYGVKPSIYHRDIKATNILLGADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGNIDEALDASLLKDGDCPSSNPKSIMERFLLVGILCSHVMVALRPTISEALKMLEGDVEVPEIPDRPLPLGHPSFYNDGNNTFSISPVLSGPKLHSGDMLR 652
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0407 652 Gene3D Transferase(Phosphotransferase) domain 1 398 613 - -
Acco03g0407 652 SMART serkin_6 314 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0407 652 CDD STKc_IRAK 320 607 - -
Acco03g0407 652 PANTHER OS01G0750732 PROTEIN 56 613 - -
Acco03g0407 652 Pfam SPARK 31 197 IPR043891 -
Acco03g0407 652 SUPERFAMILY Protein kinase-like (PK-like) 292 606 IPR011009 -
Acco03g0407 652 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Acco03g0407 652 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 398 613 - -
Acco03g0407 652 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Acco03g0407 652 ProSiteProfiles Protein kinase domain profile. 314 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0407 652 Pfam Protein kinase domain 316 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0407 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Acco03g0407 652 FunFam probable receptor-like protein kinase At1g11050 278 397 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco03g0407 Acco-ChrAcco03 5066604 5068562 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0407 25 652 Receptor kinase-like Gene Family AT1G11050 64.331 0.0 788
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Acco03g0407 Pkinase 3.9e-42 CL0016