Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0406 ATGGAGAAGAAGGATTCATCAGAGTCCAGCTTGAAGAATGAAAACGAAGAGAAGAGAGAGAAAGATTTGGAAGAGCAGCCTCATCTTGAAGAAGACTATGAATCTCCAACTTTCAATCTTCAAAATGTTTCGAAAGTCATTCTTCCTCCTTTGGGTGCTTCCAGTTATAATGATGATCACAACTCATCACCTCATCACTCCAAAACCTGGATCATATCTCCAATGGATACCAGATACAGGTGTTGGGAGAGTTTGATGGTGGTGCTGGTGGGATATTCAGCATGGGTGTATCCATTTGAAATAGGGTTTCTGATGTCAACTCCAACACATAAACTGTTCATAGTTGATAATATCGTTGATCTCTTCTTTGCCATTGACATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGCTCCACTCATCTTCTTGTTCGAGACTCCAAACAAATTGCTCTCAGGTACGTATCGACATGGTTTGTGATGGATGTGGCGTCAAGCATACCATATGAGGCATTGGGTTATTTGTTCACAGGCAAACGTAGAGTGGGGCTTCCCTTCTTCCTCTTGGGCATGCTTAGACTTTGGAGGCTTCGAAGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATCAGATTCAGCTATTTTTGGATCAGATGCTTTAGACTTTTTTGTGTGACATTTTTCATAGCACACTGTGGTGGGTGTCTGTACTATCTACTAGCAGACGTGTACCCTCACTTAGGGAGGACATGGATGGGGACAATAAATCCAAGTTTCAAAGAGACAAGCATTTGGATTAGATACATATCAGCAATGTATTGGTCTCTCACCACCATGACCACTGTAGGCTATGGTGACTTCCATGCTGTGAATCCCATGGAGATGGCCTTCACCATTTGTTACATGCTCTTCAATCTTGGCCTCACTGCTTACTTGATTGGCAATATGACCAATCTTGTTGTCCGACGAACTTGTCGTACCATGGAATTCAGAAACAACATTGAAGCAGCAACAAATTTTGTGAGCAGAAACAGAGTATCTGCGAGGCTAAAAGAGCAAATCATTGCTTATATGTGCTTAAGATACAAGGCAGAGAGTTTAAACCACCATCAGCTTATGGAACAACTGCCCAAATCAATACGCAAAAACATTTGTCAACACTTGTTCCTTCCTGCTGCAAAAAATGTTTATCTTTTTGAAGGGCTCTCCAAAGAAATCTTGTTGTCCTTGGCTGCAAAAATGAAGGCTGAGTACATACCTCCAAAAGAAGAAGTGATCATGCAAGGTGAAGCAGCAGAGGATGTTTACATAATAGTGTCAGGAGAAGTGGAGATCATTGATTGTGTGATGAACAAAGAGAAAGTTTTAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGTGCGCTATGTTGTAAGCCTCAAAACTTCACTTACAGAACCAGGACCCTTACACAGCTATTGAGGCTCAAAACCAGTGATTTTACTGACACTATGCAGACTAAAAAAGATGACAATATACAAATGCTCAAAAATTTCCTTCAGCACTTGAAGAAACTCCATGATCTAAATGCCAAAGAGTCGGTGATTGATTGGAGCAAAGAAGATGACCCAAATATGGCTGTGAACTTGTTACATGTGGCCTCAACTGGCAATTCTGCTCTTCTTGAAGAGCTTTTGAAGGCAGGCTTGGATTCTAGTGTTGCAGACTCCAAAGGCAAATCCCCATTGCACATAGCAGCATTAAATGGGCACGAAGAGTGTGTAAAAGTGTTACTTAAGCATGCATGCAACGTACATGCAAGAGACATGAATGGAGACACAGCACTATGGGATGCCATAGTTTCAAAGCATTACTCAATATTCAGAATCCTGTACCAGCTTTGTGTGCAGTCTAATCCACACACAGCAGGTGATCTTCTTTGTAAAGCAGCAAAGAGGAATGAGCTAACAGTGATGAGTGAGCTTTTAAAGCAAGGCTTGAACATAGAGTCCAAAGATCACCATGGTTGTACGGCAATGAAAGTTGCCTTGCAGCAGAATCATGTGGACATGATTCAATTGCTTTACATGAACGGCTCAGATGTTGGTGGTGCTCTTAATTATAATAATAATAATAACCAAGAAGAAGGAGGGCAACCCAACAATATTTGGCGAACATATAATAATAGTAATAATCATAGGCAAATTGCTTCAAGAGTTAGCATATTTAGAGGTCATCCTATATTGAGAAGTCAACAAGGTTGCATTGAAGCTGGCAAGATGATAAGGTTCCCTAACTCAATAGAGGAGCTCAAGACCATTGCAGGTGAAAGATTTGGGTTTGATGCAAAAGATGCAATGGTGACTGACGAAGGAGGAGCAGAAATAGATTCCATTGATTGTATCAGAGATAATGATAAACTGTTTATTATTGATTAA 2427 0.4067 MEKKDSSESSLKNENEEKREKDLEEQPHLEEDYESPTFNLQNVSKVILPPLGASSYNDDHNSSPHHSKTWIISPMDTRYRCWESLMVVLVGYSAWVYPFEIGFLMSTPTHKLFIVDNIVDLFFAIDIVLTFFLAYIDRSTHLLVRDSKQIALRYVSTWFVMDVASSIPYEALGYLFTGKRRVGLPFFLLGMLRLWRLRRVKQYFTRLEKDIRFSYFWIRCFRLFCVTFFIAHCGGCLYYLLADVYPHLGRTWMGTINPSFKETSIWIRYISAMYWSLTTMTTVGYGDFHAVNPMEMAFTICYMLFNLGLTAYLIGNMTNLVVRRTCRTMEFRNNIEAATNFVSRNRVSARLKEQIIAYMCLRYKAESLNHHQLMEQLPKSIRKNICQHLFLPAAKNVYLFEGLSKEILLSLAAKMKAEYIPPKEEVIMQGEAAEDVYIIVSGEVEIIDCVMNKEKVLGILQRWDMFGEVGALCCKPQNFTYRTRTLTQLLRLKTSDFTDTMQTKKDDNIQMLKNFLQHLKKLHDLNAKESVIDWSKEDDPNMAVNLLHVASTGNSALLEELLKAGLDSSVADSKGKSPLHIAALNGHEECVKVLLKHACNVHARDMNGDTALWDAIVSKHYSIFRILYQLCVQSNPHTAGDLLCKAAKRNELTVMSELLKQGLNIESKDHHGCTAMKVALQQNHVDMIQLLYMNGSDVGGALNYNNNNNQEEGGQPNNIWRTYNNSNNHRQIASRVSIFRGHPILRSQQGCIEAGKMIRFPNSIEELKTIAGERFGFDAKDAMVTDEGGAEIDSIDCIRDNDKLFIID 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0406 808 Gene3D - 80 322 - -
Acco03g0406 808 Gene3D Helix hairpin bin 326 390 - -
Acco03g0406 808 Pfam Cyclic nucleotide-binding domain 419 503 IPR000595 -
Acco03g0406 808 FunFam Potassium channel KAT3 81 323 - -
Acco03g0406 808 Pfam Ion transport protein 80 324 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco03g0406 808 CDD CAP_ED 399 512 IPR000595 -
Acco03g0406 808 MobiDBLite consensus disorder prediction 1 34 - -
Acco03g0406 808 FunFam Potassium channel KAT2 387 523 - -
Acco03g0406 808 SUPERFAMILY cAMP-binding domain-like 327 519 IPR018490 -
Acco03g0406 808 Gene3D Jelly Rolls 395 528 IPR014710 -
Acco03g0406 808 Gene3D - 542 723 IPR036770 -
Acco03g0406 808 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Acco03g0406 808 ProSiteProfiles KHA domain profile. 735 808 IPR021789 -
Acco03g0406 808 SMART cnmp_10 399 516 IPR000595 -
Acco03g0406 808 ProSiteProfiles Ankyrin repeat region circular profile. 671 698 - -
Acco03g0406 808 MobiDBLite consensus disorder prediction 1 32 - -
Acco03g0406 808 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 426 442 IPR018488 -
Acco03g0406 808 PANTHER POTASSIUM CHANNEL AKT1 40 806 IPR045319 GO:0005249|GO:0006813
Acco03g0406 808 SMART ANK_2a 671 700 IPR002110 GO:0005515
Acco03g0406 808 SMART ANK_2a 574 603 IPR002110 GO:0005515
Acco03g0406 808 SMART ANK_2a 607 638 IPR002110 GO:0005515
Acco03g0406 808 SMART ANK_2a 542 570 IPR002110 GO:0005515
Acco03g0406 808 Pfam Ankyrin repeats (3 copies) 547 628 IPR002110 GO:0005515
Acco03g0406 808 ProSiteProfiles Ankyrin repeat profile. 671 698 IPR002110 GO:0005515
Acco03g0406 808 SUPERFAMILY Ankyrin repeat 507 699 IPR036770 -
Acco03g0406 808 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g0406 808 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g0406 808 PRINTS EAG/ELK/ERG potassium channel family signature 269 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g0406 808 PRINTS EAG/ELK/ERG potassium channel family signature 295 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g0406 808 PRINTS EAG/ELK/ERG potassium channel family signature 313 322 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g0406 808 Pfam KHA, dimerisation domain of potassium ion channel 735 806 IPR021789 -
Acco03g0406 808 SUPERFAMILY Voltage-gated potassium channels 74 324 - -
Acco03g0406 808 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Acco03g0406 808 Coils Coil 6 26 - -
Acco03g0406 808 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0406 Acco-ChrAcco03 5039125 5049491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0406 30 579 Ion Channels AT4G22200 65.523 0.0 760