Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0384 ATGGAGTCCCTGGATCTTTCCCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACACTATCTTAAATACATCAATCTTTCCTACAATTTACTGCATGGAGAAATTCCAAATGGTGGACCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTATGAAGGGAAACAAGCATATATCAAATAAAGTGATGCTGATAATAAAATGCATATTTCCTATCATATTTGTCATTTTGATTGTTTCAATCATTGTCTTTCTAAAGAATAAGAGAGGTGATGATAATAATTCAACAAAGAGGGATTTAATAAATTTGAATACACCAACCAGGATATCCTACTATGAGCTTCTACAAGGAACAAATAGATTTGATGAGAGTAATCTTATTGGTTCTGGAAGTTTTGGATCAGTATACAAAGCAGTTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACTTAGACATGGAACAATCATCGAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATTTACGCCATCGCAATCTCATTAAGATCGTCAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTGTACTCTCATAACAATTATTTAGATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGTTGCTTTGGAGTATCTTCATCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGCTAGACGAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTTCTAAATTGTTTGGTGAAAAGCAATTGGAAATTTACACCAACACTTTGGCTACAATTGGCTATATGGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCCGCCAAAGGAGATGTGTATAGCTATGGGATTTTGCTAATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTAAGAAACTCCACACCACATTCGATCATTAATATTTTAGATGCCAATTTGCTATACGGTGAAAATCAAAATACTGATAATACACTACCTTGTATGTCATCAGTTTTTGAGTTAGCATTAAATTGCTCCATTGACTTACCAGAGGCACGACTTACTATGATAGATGTTGTAGTATCATTGAAAAAAATCAAAGCTTTGTTTATGGAAAATCCTTGA 1272 0.342 MESLDLSHNYLSGVIPKSLESLHYLKYINLSYNLLHGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCMKGNKHISNKVMLIIKCIFPIIFVILIVSIIVFLKNKRGDDNNSTKRDLINLNTPTRISYYELLQGTNRFDESNLIGSGSFGSVYKAVLPNEKIVAVKVFNLDMEQSSRSFDVECSAMCHLRHRNLIKIVSSCSNDHFKSLIMEFMENGSLDKWLYSHNNYLDVLQRLNIMIDVAVALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGISKLFGEKQLEIYTNTLATIGYMAPEFGSKGVVSAKGDVYSYGILLMEMFTRKKPTDEMFVQGLSLKDWVRNSTPHSIINILDANLLYGENQNTDNTLPCMSSVFELALNCSIDLPEARLTMIDVVVSLKKIKALFMENP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0384 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Acco03g0384 423 Pfam Protein kinase domain 141 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0384 423 SUPERFAMILY Protein kinase-like (PK-like) 115 412 IPR011009 -
Acco03g0384 423 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Acco03g0384 423 SUPERFAMILY L domain-like 2 59 - -
Acco03g0384 423 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Acco03g0384 423 SMART serkin_6 140 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0384 423 FunFam Serine-threonine protein kinase plant-type 120 215 - -
Acco03g0384 423 Pfam Leucine rich repeat 2 36 IPR001611 GO:0005515
Acco03g0384 423 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 216 422 - -
Acco03g0384 423 PANTHER OS04G0122200 PROTEIN 3 417 - -
Acco03g0384 423 Gene3D Phosphorylase Kinase; domain 1 102 215 - -
Acco03g0384 423 ProSiteProfiles Protein kinase domain profile. 140 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0384 423 Gene3D Transferase(Phosphotransferase) domain 1 216 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0384 Acco-ChrAcco03 4794382 4795824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0384 1 421 Receptor kinase-like Gene Family AT3G47570 40.708 9.86e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0384 Pkinase 1.7e-46 CL0016