Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0382 ATGACGGCCAAACATACAAACCTCTGGCTTATTGCCTACTCACAAGAGATTGTAGATGGGCAGCCAATTTTTGTTTCTTCGAATTGTTTTCCTATTAAGGCTTCAAACTTTGAACCTGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCATGGTGTTGAAGAAGATAATGCAGATGGTGATGATAAGAAGGTGGTTGATGATAAGGAACAGATGCATTTTGCATCATCTGATTCTTATAGCACCAAGGGTAAAAAGAAATCTAGTGCTGGAGACAAGCAGCTAGATCACTATGCATTATTGGGTTTGGGCCATCTGAGGTATCTTGCTTCGGAAGATCAAATCCGTAAAAGCTATCATGAAACTGCCTTGAGGTATCATCTGGATAAACAGGCTGCTCTTCTTCTTAGTGAGGAGACTGAAGCTGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGAAATCGAAGAAGCATATGAAGTATTGATTGATCCGTTGAAGAGAAGAATATATGATTCTACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCCACAAGACTTCTTCAAAGTGTTTGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCCCGAGACCATAACAGGTGGATTGAAAGACAGAGTGCAAAATTGTCAGAAAAAGCGAGAAAGGAAGAGTATGCACGGATTCGTGCTCTTGTTGATAATGCTCATAAGAGAGACCCAAGAATATTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGAAAAGGAAAAAAGAGGCTAAGATTCTGGCCAAAAAATTTCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGGTGAGAAGAGACGGAAAGAGGAGGAGGAGAGACAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTAAGGAAAGAGAGAACCCGTCTTCGAACACTTGCAGCAGCCATCTTGTCACAGAGAACACATGACATATCTGAGGATGATATAGAAAGTGTTTGCCTGTCACTTGATATTGAGAAGTTGAGGAGTTTGTGCCAAATGATTGAAAGAAAACCTATCTCAGAGCAAGCTGAAATTCTAAGAGATGCTTGTGGTTCTAAAAAAGATGTGGATGACAAGAAATCTGGGAAAACTGATAAAAATGATGGTTCTACAAGTGCTAATGGTAGTGCCTCACTAGGCAGCACCACCAATGAAAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATCGAGCTGTTGAGAAAAGCAATGCAAAAATATCCTAAAGGAACTTCTAGGAGGTGGGAGGTAATTTCAGACTACATTGGTACAGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAATACAGTTCTGCTCCAGAAGCCTGATTCTTCTAAATCATTCGATGCATTCCTTGAGAAAAGGAAACCTGCGCCATCAATTGCATCTCTGCTCTCAACCCGAGAAGAATTAACCGGTGAATCAGCTCCTGGAAGGCCTGCAAACGGTACTACCTCAGCAACAAATAACTCTGAAGAGTCTCATGGCAAGATTACTTCAGACAACCCGAGCTCTTCTGGTTCAGCCTCTGCCGGTGGAGCTTCCTCTAGTTCAGATCAAGACGGGTGGTCTGATGTTCAGGAAAAAGCACTGGTCCAGGCTCTGAAAACTTTCCCCAAGGAAACTAACCAGAGATGGGAGCGAGTCGCGGCTGCAGTTCCTGGGAAGACAGTAAATCAGTGCAAGAAGAAATTTGTCATGTTGAAGGAGAACTTCAGAAGCAAGAAAAGTGCAGCTTGA 1836 0.4216 MTAKHTNLWLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLHGVEEDNADGDDKKVVDDKEQMHFASSDSYSTKGKKKSSAGDKQLDHYALLGLGHLRYLASEDQIRKSYHETALRYHLDKQAALLLSEETEAAKQAKKDEIESHFKEIEEAYEVLIDPLKRRIYDSTDEFDDEIPTDCSTRLLQSVCWREFPHADEFDLEQAESRDHNRWIERQSAKLSEKARKEEYARIRALVDNAHKRDPRILRRKEEEKAEKKRKKEAKILAKKFQEEEAARIAEGEKRRKEEEERQAAEAALQQKKVKEKEKKLLRKERTRLRTLAAAILSQRTHDISEDDIESVCLSLDIEKLRSLCQMIERKPISEQAEILRDACGSKKDVDDKKSGKTDKNDGSTSANGSASLGSTTNEKKEKPWSKEEIELLRKAMQKYPKGTSRRWEVISDYIGTGRSVEEILKATNTVLLQKPDSSKSFDAFLEKRKPAPSIASLLSTREELTGESAPGRPANGTTSATNNSEESHGKITSDNPSSSGSASAGGASSSSDQDGWSDVQEKALVQALKTFPKETNQRWERVAAAVPGKTVNQCKKKFVMLKENFRSKKSAA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0382 611 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Acco03g0382 611 MobiDBLite consensus disorder prediction 490 560 - -
Acco03g0382 611 MobiDBLite consensus disorder prediction 382 424 - -
Acco03g0382 611 PRINTS DnaJ domain signature 120 135 IPR001623 -
Acco03g0382 611 PRINTS DnaJ domain signature 151 171 IPR001623 -
Acco03g0382 611 PRINTS DnaJ domain signature 102 120 IPR001623 -
Acco03g0382 611 CDD SANT 555 601 IPR001005 -
Acco03g0382 611 Coils Coil 256 325 - -
Acco03g0382 611 SUPERFAMILY Homeodomain-like 421 464 IPR009057 -
Acco03g0382 611 Gene3D - 545 611 - -
Acco03g0382 611 FunFam Myb family transcription factor 549 609 - -
Acco03g0382 611 ProSiteProfiles Myb-like domain profile. 415 470 IPR001005 -
Acco03g0382 611 ProSiteProfiles SANT domain profile. 550 605 IPR017884 -
Acco03g0382 611 MobiDBLite consensus disorder prediction 286 314 - -
Acco03g0382 611 SUPERFAMILY Homeodomain-like 553 607 IPR009057 -
Acco03g0382 611 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 198 610 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Acco03g0382 611 SMART sant 419 472 IPR001005 -
Acco03g0382 611 SMART sant 551 603 IPR001005 -
Acco03g0382 611 CDD SANT 422 462 IPR001005 -
Acco03g0382 611 MobiDBLite consensus disorder prediction 399 417 - -
Acco03g0382 611 Pfam DnaJ domain 97 176 IPR001623 -
Acco03g0382 611 CDD DnaJ 97 168 IPR001623 -
Acco03g0382 611 Pfam Myb-like DNA-binding domain 555 600 IPR001005 -
Acco03g0382 611 Pfam Myb-like DNA-binding domain 421 462 IPR001005 -
Acco03g0382 611 ProSiteProfiles Myb-like domain profile. 547 597 IPR001005 -
Acco03g0382 611 Gene3D - 415 472 - -
Acco03g0382 611 SUPERFAMILY Chaperone J-domain 70 175 IPR036869 -
Acco03g0382 611 SMART dnaj_3 96 171 IPR001623 -
Acco03g0382 611 MobiDBLite consensus disorder prediction 510 556 - -
Acco03g0382 611 Gene3D DnaJ domain 80 190 IPR036869 -
Acco03g0382 611 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Acco03g0382 611 MobiDBLite consensus disorder prediction 382 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0382 Acco-ChrAcco03 4741252 4743208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0382 98 177 C2H2 Transcription Factor Family AT1G74250 40.000 9.00e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco03g0382 DnaJ 1.2e-13 CL0392