Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0380 ATGGCTCAACTTTCGACTTTCATGTTCTTCTCCTTCGTCTTCGTCTTCGTCTCACCTCTTTCCTATGGGTACGACCCACTGGATCCCAATGGAAACATCACAGTCACATGGGATTTCATTGCTGATAATGGGGACACATACGATGTGAGGGTATCAATATACAACTGGCAACTATACCGACACGTGGAGAAGCCGGGTTGGAGGCTGAGCTGGGGATGGAGAGGTGATGAGGTGATATGGAGCATGTCAGGAGCAGAGGCAATAGAGCAAGGGAATTGTTCAAGGTTTAAGGGACAAAACAAGCCACATTGTTGTGAGAAGCAACCAACCATTATTGATCTTATGCCTGGAACACCTTATAACAAGCAAGTCCCCAATTGTTGTAAACAAGGCATCTTATCATCTCTCACTCAAGATCCTTCACACATCACTTCCATGTTTCAGATGAATTATAATAAACCCTCTGTTCCAAACCCTGACAATGTCACCATGCCTACTAATTTTAGCCTTGGAATCCCTGGTTATTCTTGTAGTGAGCCTACTCAAGTCCCTCCTAGCAAGTTCACCACCAATGGTCGTCGTTGGATTGAAGTTCTTGAAACATGGAACGTGACTTGTATATACTCTCAATTCTTATCATCACCAGCTCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGAGACCATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCAGGGTCAAGCTGTGTCAATTCTGATAAAGCTCCTTCATTGTTGAAACTTCCACAAGATGATAGCACACAAGAGATAGAACCAGTGGTGAGGTGTTCACAGCACATGTGTCCTATTAGGATTCACTGGCATGTGAAGCAGAGCTATACCAAGTATTGGAGGGTGAAGATCACAATCACAAATTATAACTTTGTCAAGAACTATTCACAGTGGAATCTTGTGCTCTTACACCCTAATTTGCATAGTTTAACTCAAGTCTTCAGCTTCAACTACCAACCTCTCAGAATTTTTGGGGATGTCAATGATACAGCGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGACACATGGGGAAAATGGGAATGTACAAACAGAGATTCTACTTGGCAAAGATGCTGGAATCTTCACCTTCAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGAATGTGTTATGCCCAGTCCTGATGATTATCCTACCCTACCCAATACTGCTTTTTCTCTCTCCTCTTCTTCTTTCTTGCTTTTCTTATCTTTTATCCTCTCAATATTGTTATGA 1311 0.4233 MAQLSTFMFFSFVFVFVSPLSYGYDPLDPNGNITVTWDFIADNGDTYDVRVSIYNWQLYRHVEKPGWRLSWGWRGDEVIWSMSGAEAIEQGNCSRFKGQNKPHCCEKQPTIIDLMPGTPYNKQVPNCCKQGILSSLTQDPSHITSMFQMNYNKPSVPNPDNVTMPTNFSLGIPGYSCSEPTQVPPSKFTTNGRRWIEVLETWNVTCIYSQFLSSPAPKCCVSLSAFYSETIVPCPKCSCNCQGLPGSSCVNSDKAPSLLKLPQDDSTQEIEPVVRCSQHMCPIRIHWHVKQSYTKYWRVKITITNYNFVKNYSQWNLVLLHPNLHSLTQVFSFNYQPLRIFGDVNDTAMFWGIKYYNDMLLTHGENGNVQTEILLGKDAGIFTFNGGWGFPRTVLFNGDECVMPSPDDYPTLPNTAFSLSSSSFLLFLSFILSILL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0380 436 PIRSF COBRA 1 436 IPR006918 GO:0010215|GO:0016020
Acco03g0380 436 PANTHER PROTEIN COBRA 12 428 IPR006918 GO:0010215|GO:0016020
Acco03g0380 436 Pfam COBRA-like protein 47 209 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0380 Acco-ChrAcco03 4708699 4712832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0380 7 436 COBRA Gene Family AT3G29810 51.020 1.31e-163 466