Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0379 ATGGCTCTTTGGAGAGCTCGCGCAGCCTCGTCTGCATTTTCGAGAATCAGCAACCTCAACTTCAACTTCCTGAAGCCCTTCTCATTCCTCAACAATGCTTCTCGCAATTTCTCTTCCGATTCTGCAAAAGCATATTCTCGTAAGGCACATGAGAGCATAGTGAATCAAATGATGTTTTCTGACATAAATGCACAAATCGGGAGTTGCATGCCGCTTAATGTAATGCGAATTGGGACAATCATTCATAATATTGAGATGAAGCCAGGGCAAGGAGGCAAACTGGTCCGATCAGCTGGGACTTGTGCAAAGATTTTGAAAGATCCTTCACAAAGTTATGTCTTAATTGAACTCCCTTCAAAGAAGAAAAAGTTGATTGATTCTCGTTGCAGGGCTACAATTGGTAGAGTGTCTAATCCGACCCACAGAGATCGGGAGCTTAGGAAGGCCGGGCAGAGCCGGTGGCTCGGTCGGAGGCCGGTTGTTCGAGGAGTGGCCATGAATCCTGTAGACCATCCTCATGGTGGAGGAGAGGGTAAGAGTAAGAGCAGTGGAAAATATGGGAGAGTTTCTGTTTCTCCTTGGGGAAAACCAACTAAAGGTGGATACAAAACTGGCCCACTAAAGCGCAGAAAGTAG 636 0.4638 MALWRARAASSAFSRISNLNFNFLKPFSFLNNASRNFSSDSAKAYSRKAHESIVNQMMFSDINAQIGSCMPLNVMRIGTIIHNIEMKPGQGGKLVRSAGTCAKILKDPSQSYVLIELPSKKKKLIDSRCRATIGRVSNPTHRDRELRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGKYGRVSVSPWGKPTKGGYKTGPLKRRK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0379 211 MobiDBLite consensus disorder prediction 138 152 - -
Acco03g0379 211 SUPERFAMILY Translation proteins SH3-like domain 66 201 IPR008991 -
Acco03g0379 211 FunFam 50S ribosomal protein L2 137 211 - -
Acco03g0379 211 SMART Ribosomal_L2_C_2 64 197 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco03g0379 211 Pfam Ribosomal Proteins L2, C-terminal domain 66 195 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco03g0379 211 MobiDBLite consensus disorder prediction 138 211 - -
Acco03g0379 211 PANTHER RIBOSOMAL PROTEIN L2 59 209 IPR002171 GO:0003735|GO:0005840|GO:0006412
Acco03g0379 211 FunFam 60S ribosomal protein L2, mitochondrial 60 136 - -
Acco03g0379 211 Gene3D Ribosomal protein L2, domain 3 137 211 IPR014726 -
Acco03g0379 211 NCBIfam 50S ribosomal protein L2 60 207 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Acco03g0379 211 ProSitePatterns Ribosomal protein L2 signature. 159 170 IPR022671 GO:0003735|GO:0005840|GO:0006412
Acco03g0379 211 Gene3D - 55 136 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0379 Acco-ChrAcco03 4702068 4703863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0379 63 176 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.833 2.04e-22 90.1