Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0377 ATGGAGACACAGTTCAATCACTCTCTCTTCGACCGGCACTGCGTCATCAAGTCTAAGACTCCTGCCGCTAAATGGGTTAAAGAATGTTTGTCTAGTGTGCTAATACTGAGGTACCCGCCTGCCAGGGTTCTCCAGGATGATGTGGCCACTGGTGGGAAGTGCATGCTTTTCAGATGGGTAAGAGAGGATTCCTTGAAGTCCTTGAAGGACAAGGAAAAAGAACCATCTGTGCCTGAGCCAACTACTGAAGTACTTTTTCTCTGTAGCTATGAAGGCTGTGGGAAAACTTTTATAGATGCTGGTGCTTTGAAAAGGCATTCTCACATCCGTGGAGAGAAGCAATTTGTTTGTGATCATGAGGGTTGTGGGAAGAAATTTCTGGAACTTTCGAAGCTGAGAAGACATAATCTCAGCCATACTGGGGAAAAGGCTCATGTGTGTCCCATTGAAGGCTGTGGTAAGGCCTTCTCCCTCGATTTTAACCTAAAGTCTCACATGAAAACACATTCACAAGATAACTACCATGTCTGCAAATATCCAGATTGTGGAAAGAGATACGCTCACGAATACAAGCTTAAGAACCACATTGCAGCACACCATGAAAAGAATGGTTCTATGGATCCGAATGGGACAAAGTATAATACTCCACAGTCAGAGAAGCCGACAAAAGCCACAAAACCTTCTACATCCTCTGATCGTCCCTTTGTTTGTCCTTACGAAGGGTGTGAAAAGGCCTATATCCATGAATATAAACTTAATCTCCATTTGAAGAGGGAGCATCCTGGGCATGGTGATGAAAATGTTGCAGAGAATGCTCAGGCTAATAATAACAATGCTGACAATGAAGTGGATGAAGCTATCGATCCAGATGCCTATGGCGGGAAACGATCAAATGGTAGAATTCTGAAGCAGAGTAAGCCCAAACCAAGCTTGAAGTTGCCTCCACGAAAAATTGCTCGAGGCAAAGCAACAGCAACACCCTCTTCAGTGACCCCTATGAAGGTAATCAACAAAAAACCTTGGCCAGTGAAAGAAGAAAGCTACCAGGAAGAAGACAGCGAAGAAACAGAGGAGGATCGGGACAATGTTGAAGATGGTTGGAGGTATGCAGTAAACACTGAGGATGATGATGAAGAAACAGAATATGAGGACTGA 1155 0.4416 METQFNHSLFDRHCVIKSKTPAAKWVKECLSSVLILRYPPARVLQDDVATGGKCMLFRWVREDSLKSLKDKEKEPSVPEPTTEVLFLCSYEGCGKTFIDAGALKRHSHIRGEKQFVCDHEGCGKKFLELSKLRRHNLSHTGEKAHVCPIEGCGKAFSLDFNLKSHMKTHSQDNYHVCKYPDCGKRYAHEYKLKNHIAAHHEKNGSMDPNGTKYNTPQSEKPTKATKPSTSSDRPFVCPYEGCEKAYIHEYKLNLHLKREHPGHGDENVAENAQANNNNADNEVDEAIDPDAYGGKRSNGRILKQSKPKPSLKLPPRKIARGKATATPSSVTPMKVINKKPWPVKEESYQEEDSEETEEDRDNVEDGWRYAVNTEDDDEETEYED 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0377 384 Gene3D Classic Zinc Finger 207 280 - -
Acco03g0377 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 145 174 IPR013087 -
Acco03g0377 384 FunFam zinc finger transcription factor YY1 172 203 - -
Acco03g0377 384 FunFam Putative zinc finger protein 143 112 142 - -
Acco03g0377 384 SUPERFAMILY beta-beta-alpha zinc fingers 229 258 IPR036236 -
Acco03g0377 384 ProSitePatterns Zinc finger C2H2 type domain signature. 147 169 IPR013087 -
Acco03g0377 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 115 IPR013087 -
Acco03g0377 384 Gene3D Classic Zinc Finger 113 143 - -
Acco03g0377 384 ProSitePatterns Zinc finger C2H2 type domain signature. 177 200 IPR013087 -
Acco03g0377 384 SMART c2h2final6 235 260 IPR013087 -
Acco03g0377 384 SMART c2h2final6 86 108 IPR013087 -
Acco03g0377 384 SMART c2h2final6 145 169 IPR013087 -
Acco03g0377 384 SMART c2h2final6 115 139 IPR013087 -
Acco03g0377 384 SMART c2h2final6 175 199 IPR013087 -
Acco03g0377 384 Gene3D Classic Zinc Finger 144 173 - -
Acco03g0377 384 Gene3D Classic Zinc Finger 174 204 - -
Acco03g0377 384 Gene3D Classic Zinc Finger 87 112 - -
Acco03g0377 384 ProSitePatterns Zinc finger C2H2 type domain signature. 237 260 IPR013087 -
Acco03g0377 384 SUPERFAMILY beta-beta-alpha zinc fingers 126 179 IPR036236 -
Acco03g0377 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 144 IPR013087 -
Acco03g0377 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 204 IPR013087 -
Acco03g0377 384 ProSitePatterns Zinc finger C2H2 type domain signature. 117 139 IPR013087 -
Acco03g0377 384 Pfam Zinc finger, C2H2 type 145 169 IPR013087 -
Acco03g0377 384 MobiDBLite consensus disorder prediction 199 233 - -
Acco03g0377 384 MobiDBLite consensus disorder prediction 207 232 - -
Acco03g0377 384 SUPERFAMILY beta-beta-alpha zinc fingers 89 139 IPR036236 -
Acco03g0377 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 235 265 IPR013087 -
Acco03g0377 384 FunFam Zinc finger protein 410 143 170 - -
Acco03g0377 384 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 42 358 - -
Acco03g0377 384 MobiDBLite consensus disorder prediction 276 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0377 Acco-ChrAcco03 4681777 4685380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0377 10 370 C2H2 Transcription Factor Family AT4G06634 54.948 2.30e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco03g0377 zf-C2H2 0.00047 CL0361