Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0371 ATGGATCTTCTCTTTCTTGCCTGTGTCTTTCTCTTCACCGCCCATTGCTCAGAAGCTATTGCTACTTCGGTCCCTAACGACGCATTGTCCCTTCTCAGCTTCAAGGGCTCTGTCTCTTCCGAATCTTCGGGTCTTCTCTCTGGATGGAGTAAGGAGTCTTCTGAAAGTTACTGTCAATGGCACGGCGTCACTTGTGAGAATAGGCTCTCTGGCAGAGTTATTGCTTTGAACTTGACCGAACTTCGCGGCGGCAAGCTCACTCCTTCCATTGCAGATTTGTCTGAGCTTCGGGTTTTGTCCCTTCCCCACAATATGTTCTCCGGTGAGATCCCGGAGACTTTGGGGAAGCTTCGGCTTCTGGAGGTTCTTGAGCTTCAGGGAAATAATTTTTCCGGGAGGATCCCAAACCAGATGAGCTATCTTCCATCTCTTCGCATTCTTAACCTCTCTAATAATGCTTTTTCCGGTGCTATACCCGGTAAATTGATTGGCTCTGGAAATGTTAGCGGCATTGACTTGTCCAATAATCAGCTTTCTGGTCCAATTATAGATAGTTTCAATACTGACGTTGAAACTTTGATTCATTTGAAGCTGTCCCACAACTTCCTTACAGGCAAAATCCCCTCCGAAATTGGGAAATGCAGAAATTTGAGGATGCTTTTACTCGATGGGAATATCTTAGAAGGCAGTATTCCTTATGAGATTGGGAATATGACGGAGCTCAGACTTCTAGATGTCTCTAGAAATAGTCTCACCGGAAGGATTCCGAAAGAGATAGCCGACTGCTGGAAACTGTCAGTGCTTGTGTTGACTAATTTACTTGATGATAATGCTTCCCCTGATGAGAGCTTGGCGAATAGCTTCAGGGGAGAATTTAATGCTTTTGTTGGAAATATTCCTCCTCAGGTGTTGTTGCTTTCAAGTTTAGAGATCTTGTGGGCACCAAGAGCGAATCTTGGCGGACGGTTGCCTAGGGGCTGGACAGATTCATGCTCGCTGAGAGTACTCAACTTGGCAGAGAATTATATTGTTGGGGGGATACCAGAAACCTTGGGGATGTGCAGTAATTTAACTTTCCTTGACTTGAGCTCTAACAATTTAGTGGGGTATCTTCCCTCAAAGCATCTTCAAGTTCCATGTATGGTGTACTTCAATGTCAGCCGGAATAATCTATCTGGCACACTTCCAGGATTTGAGAAGGAAAGCTGTGATTTAAGCAGAACTCTAGGTGATGTACGTGTTGATATTCTAGTTTGGGAATCTCTGATGGATGCTCTCGGTGGATCAGGTTCAGATGATGCTGTCGTCATTAACCATGATTTCAGTTGGAATAACTTTACGGGATCTTTACCTTTTTTCTCATTTTTAGGTACTACAGACAATAAGATTTCGTACACGCTATCACTAAATAATAACAAGTTCAGTGGAAGTCTACCATATCTTTTGGTTTCCAACTGTAATGATCTCAAGATGTTAAAGGTTAACTTGAGTGTGAACCAACTCTCAGGTGGAAATTCCCCAAAATTGCTTCTTGACTGTTTGCAGTTGACAGAATTTGAGGCCGCGTACAACCAGATTGAGGGTTCAATTGATCCTCATATTGGTGACTATACAATGCTCCAGCGCCTTGATTTGACGGGGAACAAACTTACTGGATCTCTGCCTGATCAACTGGGAAGCCTGAAAGAAATGAAATGGATGCTTTTAGGAGGGAACAATATAACTGGAGAAATCCCTTCTCAACTTGGTCAATTGGATTCCCTTGTGGTTTTGAATCTATCTCACAATGCTCTTATTGGCTCAATTCCTGCAAGTTTGACAAATGCCACAACTCTTGAAACTCTGTTGCTAGATCACAACCAGCTCAATGGGGAAATACCTTCATCTTTTTCAACTCTTTCTAGTCTTGTTTGTTTTGACGTTTCTTTCAACAACCTTTCTGGTCATATTCCCCATCTTCATCACCCAAGTGATTGTGATTACTTCAAGGGGAATGTATACCTGCATTCATGCCCTGATCCATATTCTGCCTCGCCTGCTTATCTCCCTGTCCCTCTTGAAGTCCAACATTGGCATAGACGAAAAAAATTGAAGACAATAATAATAGCCGTGGTCTCTTCATTCTCTGTTGTTCTCTGTTTACTAGGAATAGTTTTGGTGGTCACTTTTGGAAGGAACAAGTTTGGTAGGCTCAGCAGCCTTCGAAGCAGACTACTAGTGACCTTTCAAGATGTTCCAATTGAACTCAGTTACGATAATGTTGTCACAGCCACAGGAAATTTTAGCCTCCAAAATCTAATAGGAACCGGTGGATTTGGGTCTACTTACAAGGCTGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGGTTGTCTATAGGTAAATTCCAAGGCATTCAACAGTTTGAGACAGAGATAAGAACCTTGGGGAGAATCCGACACAAAAACCTTGTCACTCTCATTGGCTACTATGTTGGAGAGGCCGAAATGTTCCTGATATACAACTACCTTTCAGGTGGGAACCTTGAAACTTTCATACACAACAATTCAGATAAAAATATGTTGTGGCCAATTATCTATAAGATAGCAATAGATATAGCAGAGGCCATAGCTTACCTTCATTATTCCTGTGTTCCTCGCATAGTTCATCGTGACATCAAGCCCAGCAACATCTTACTTGATGAGGATTACAATGCCTACCTTTCAGATTTTGGATTGGCTAGACTCATGGAGGTATCTGAGACCCACGCCACAACTGATGTGGAAGGCACATTTGGGTATGTTGCTCCTGAATATGCCACCACTTGTAGGGTTTCTGACAAAGCAGATGTTTATAGCTTCGGTGTTGTGTTGCTTGAATTAATGTCAGGAAGGAAGTCACTTGATCCATCTTTTTCTGAATATGGAAATGGGTTCAATATTGTCCCGTGGGCTAAGTTGCTAATGACGGAAGGACGTTCTTCTGAACTGTTTTCACCTGCTCTGTGGGAAGCAGGACCTGAGGAGAAACTCTTGGGGCTTTTAAAAGTTGCATTAATCTGCACCGTGGAGACGCTTTCGATTCGGCCATCGATGAAACATGTTCTTGAAAAATTGAAACACCTTAAAAGTTGA 3114 0.4271 MDLLFLACVFLFTAHCSEAIATSVPNDALSLLSFKGSVSSESSGLLSGWSKESSESYCQWHGVTCENRLSGRVIALNLTELRGGKLTPSIADLSELRVLSLPHNMFSGEIPETLGKLRLLEVLELQGNNFSGRIPNQMSYLPSLRILNLSNNAFSGAIPGKLIGSGNVSGIDLSNNQLSGPIIDSFNTDVETLIHLKLSHNFLTGKIPSEIGKCRNLRMLLLDGNILEGSIPYEIGNMTELRLLDVSRNSLTGRIPKEIADCWKLSVLVLTNLLDDNASPDESLANSFRGEFNAFVGNIPPQVLLLSSLEILWAPRANLGGRLPRGWTDSCSLRVLNLAENYIVGGIPETLGMCSNLTFLDLSSNNLVGYLPSKHLQVPCMVYFNVSRNNLSGTLPGFEKESCDLSRTLGDVRVDILVWESLMDALGGSGSDDAVVINHDFSWNNFTGSLPFFSFLGTTDNKISYTLSLNNNKFSGSLPYLLVSNCNDLKMLKVNLSVNQLSGGNSPKLLLDCLQLTEFEAAYNQIEGSIDPHIGDYTMLQRLDLTGNKLTGSLPDQLGSLKEMKWMLLGGNNITGEIPSQLGQLDSLVVLNLSHNALIGSIPASLTNATTLETLLLDHNQLNGEIPSSFSTLSSLVCFDVSFNNLSGHIPHLHHPSDCDYFKGNVYLHSCPDPYSASPAYLPVPLEVQHWHRRKKLKTIIIAVVSSFSVVLCLLGIVLVVTFGRNKFGRLSSLRSRLLVTFQDVPIELSYDNVVTATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLSIGKFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLETFIHNNSDKNMLWPIIYKIAIDIAEAIAYLHYSCVPRIVHRDIKPSNILLDEDYNAYLSDFGLARLMEVSETHATTDVEGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMTEGRSSELFSPALWEAGPEEKLLGLLKVALICTVETLSIRPSMKHVLEKLKHLKS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0371 1037 SMART LRR_typ_2 238 262 IPR003591 -
Acco03g0371 1037 SMART LRR_typ_2 93 117 IPR003591 -
Acco03g0371 1037 SMART LRR_typ_2 537 561 IPR003591 -
Acco03g0371 1037 SMART LRR_typ_2 141 165 IPR003591 -
Acco03g0371 1037 SMART LRR_typ_2 585 609 IPR003591 -
Acco03g0371 1037 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 725 836 - -
Acco03g0371 1037 Gene3D Ribonuclease Inhibitor 22 82 IPR032675 -
Acco03g0371 1037 Gene3D Phosphorylase Kinase; domain 1 725 836 - -
Acco03g0371 1037 SUPERFAMILY L domain-like 295 673 - -
Acco03g0371 1037 CDD STKc_IRAK 767 1035 - -
Acco03g0371 1037 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Acco03g0371 1037 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
Acco03g0371 1037 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 217 1034 - -
Acco03g0371 1037 SUPERFAMILY Protein kinase-like (PK-like) 739 1032 IPR011009 -
Acco03g0371 1037 Pfam Protein kinase domain 763 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0371 1037 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 433 678 - -
Acco03g0371 1037 FunFam Piriformospora indica-insensitive protein 2 184 278 - -
Acco03g0371 1037 Gene3D Transferase(Phosphotransferase) domain 1 837 1036 - -
Acco03g0371 1037 ProSitePatterns Protein kinases ATP-binding region signature. 767 795 IPR017441 GO:0005524
Acco03g0371 1037 ProSiteProfiles Protein kinase domain profile. 761 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0371 1037 SMART serkin_6 761 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0371 1037 FunFam Leucine-rich repeat receptor-like protein kinase 24 183 - -
Acco03g0371 1037 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 837 1037 - -
Acco03g0371 1037 SUPERFAMILY RNI-like 79 395 - -
Acco03g0371 1037 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Acco03g0371 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 881 893 IPR008271 GO:0004672|GO:0006468
Acco03g0371 1037 Gene3D Ribonuclease Inhibitor 83 286 IPR032675 -
Acco03g0371 1037 Gene3D Ribonuclease Inhibitor 287 413 IPR032675 -
Acco03g0371 1037 Gene3D Ribonuclease Inhibitor 436 663 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0371 Acco-ChrAcco03 4581072 4584185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0371 2 1036 Receptor kinase-like Gene Family AT3G02130 43.182 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Acco03g0371 Pkinase 2.8e-41 CL0016