Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0337 ATGGGTTGCTTATGCTCTAGAGGGACACATTCACACGATTATGACGCAGAGATCCGTGTCCGGAAAACGAAGAAATCCTCAAAGGGTACGTCAAGGAGAGATAGAAGACATGCAATGCAAGAGGAATGTAGTGGATCAAACGATGTAAATACTAGGTTGATATCATCAGATGAGAGTGAGAAGAATGTTGGGACAACAGGGAAACCTGGGAGTTCTCAAAGTAGAAGTATCGAAGAAAGACCAAGTAGGATGATGATGTTGAATAGGATAGGTAGTTTAAGAAGAGGAGAGAGAGGAGCCCAAGTTCTTGCTGGGTGGCCTTCATGGCTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGGTTGGACAAGGGACATATAGCAGTGTTTACAAAGCTAGAGATTTAGAGACAAATAAAGTAGTTGCATTAAAGAAGGTTCGATTTGCAAATATGGACCCAGAAAGTGTTCGTTTCATGGCTAGAGAAATCATTATATTACGAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAGGCATTATAACCTCGAGAGTTTCTGGCAGCTTGTACCTTATTTTTGAATATATGGAACATGACCTCACTGGCCTCGCAGCTCTTCCTGGCATCAAGTTTTCTGAAGAACAGATAAAGTGCTACATGCAGCAGCTATTGAGAGGGTTAGAGCATTGTCACAAGAAGGGGGTGCTACATAGAGACATAAAAGGGGCAAATTTGCTAATAGACTATAAGGGCAATTTGAAAATTGCAGATTTTGGCCTAGCCACTGTGGTGGATGGCCAATCATTGACTAGTAGAGTTGTAACCTTATGGTACAGATCACCTGAACTTTTACTTGGAGCCACCGATTATGGTGTAGGCGTGGACTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTCTTCGCCGGCGAGCCTATCATGGCTGGTCGAACCGAGGTGGAGCAACTGCATAAGATATTTAAACTATGTGGATCACCTTCTGAGAGATACTGGAAGAAGTCGAAGCTACCACATGCCACCATTTTCAAACCTCAACACGCTTATAAGCGCGTTGTTGCTGAGACATTCAAGGATTTCCCACCCTCTGCCCTCAAACTTCTCGATGTGCTTCTTGCTATAGAACCTGATGATCGAAGAACTGCTTCCTCAGCACTTCAGAGCCAGTTCTTCACGACAAAGCCGATTCCTTGTGAGCCATCAAGCATGCCGAGGTATCCACCAAGTAAGGAGTTTAATAGGAAGCTTCGAGAAGACGAAGCCAGAAGAAAAAGAGAGCCAACGAGGACAGGAAATGAACCAGAACTCTTGAATGTGAACCCTAAAGCTGTCACACCACCTGATAAGGCCGAGTCCCACCTTTCAGCAGCCACAGAGAATGGAGTAGAGCCAAAGGCAAGGCGGAGACGGGAGAAGAACGGGCTGCTGTTAGAACCGGCAAGCACAAGATCAGGACCAAAAGTACGGTGTCGTTCAGGCCAATCCACGGTGCAGAGTGCTTACATGAAGTTCATCAAGCATGAAGCTGCAGGAGAACGTGAGGTGTTTGTTGGAACTAAGAGAAAGCAAAGAGCCTACTGGAATGCCGCCAACGCCGCTCGTCTCTCCAAGTTCTCTAACTCCGTGGCCGCTGAGGGCGGCTCCCGGCTCCTGGTGATCGCCAACGGAGGAAACTCCTCCGTCGCGTGGGGAGACGACAGCTTTGACCAGAGGTATACACACGCGGCCGCCGGAGAATCTGACCTCTTGCTGCCTGCTTCCAACAAACCTCTTACCAAGAAGTTTTTGGGCTGTGACGTGATACAGGAATATGAAGGGAAGATGCAATATTCAGGAGCGTTGGAGTCAGCAACGGAGAACCTAGAAGAATTGCTGAAGCAACACCAACAACAACTTCAACAAGTCTTGCGTAAACGTGCTTTGGATCATAAGTTCAGGACTTCATCATAG 2007 0.4664 MGCLCSRGTHSHDYDAEIRVRKTKKSSKGTSRRDRRHAMQEECSGSNDVNTRLISSDESEKNVGTTGKPGSSQSRSIEERPSRMMMLNRIGSLRRGERGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKVGQGTYSSVYKARDLETNKVVALKKVRFANMDPESVRFMAREIIILRRLDHPNVMKLEGIITSRVSGSLYLIFEYMEHDLTGLAALPGIKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDYKGNLKIADFGLATVVDGQSLTSRVVTLWYRSPELLLGATDYGVGVDLWSAGCILAELFAGEPIMAGRTEVEQLHKIFKLCGSPSERYWKKSKLPHATIFKPQHAYKRVVAETFKDFPPSALKLLDVLLAIEPDDRRTASSALQSQFFTTKPIPCEPSSMPRYPPSKEFNRKLREDEARRKREPTRTGNEPELLNVNPKAVTPPDKAESHLSAATENGVEPKARRRREKNGLLLEPASTRSGPKVRCRSGQSTVQSAYMKFIKHEAAGEREVFVGTKRKQRAYWNAANAARLSKFSNSVAAEGGSRLLVIANGGNSSVAWGDDSFDQRYTHAAAGESDLLLPASNKPLTKKFLGCDVIQEYEGKMQYSGALESATENLEELLKQHQQQLQQVLRKRALDHKFRTSS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0337 668 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Acco03g0337 668 MobiDBLite consensus disorder prediction 481 495 - -
Acco03g0337 668 FunFam probable serine/threonine-protein kinase At1g54610 212 450 - -
Acco03g0337 668 SMART serkin_6 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0337 668 Gene3D Transferase(Phosphotransferase) domain 1 217 449 - -
Acco03g0337 668 Pfam Protein kinase domain 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0337 668 CDD STKc_CDK9_like 129 410 - -
Acco03g0337 668 PANTHER CELL DIVISION PROTEIN KINASE 127 416 - -
Acco03g0337 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Acco03g0337 668 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0337 668 MobiDBLite consensus disorder prediction 412 512 - -
Acco03g0337 668 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Acco03g0337 668 MobiDBLite consensus disorder prediction 429 450 - -
Acco03g0337 668 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Acco03g0337 668 Coils Coil 626 657 - -
Acco03g0337 668 MobiDBLite consensus disorder prediction 43 79 - -
Acco03g0337 668 MobiDBLite consensus disorder prediction 14 83 - -
Acco03g0337 668 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0337 Acco-ChrAcco03 4163522 4170678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0337 121 445 Core Cell Cycle Gene Families AT5G10270 49.711 9.01e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco03g0337 Pkinase 1.1e-69 CL0016