Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0335 ATGGGGTCAAGGGGAAATCACATTCTCACCCTTTTACGCATCCATCCAGCTAAAGAGGAAGCTGGACAGACGGTGAACTTCGTGCCGGCCAAAGAACATCTTGGACGTCATCAGCGTTCTTTTGCAATGGGAAGGAAAAAGTCAGAGGAAGCTGGCCCTGCCACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCAAGTATGGATGAAAAACCTGATAAACCCAAAAAAGTATCTTCTTCATCCAGTAAGCCCAAAAAATCTGCTCCAAAAGTTTCTGCATATACTGATGGTATTGATCTGCCTCCCTCTGATGATGAAGACGAAGAAGTCATGGAAGAGGAGCAAGAACAAAATAGTGTGCCAAAGCAGTCCACCCTGCAGCAAAAGCCTGACTTAAAGCCTCTTGATGTGGCTATCAGTGACAAAGAGTTAAAAAAGCGGGAAAAGAAGGATCTTCTTGCTGCCCATACTGCAGAGCTGGCTAAGCAGGAAGCACTTAAGGATGACCGTGATGCTTTCACTGTGGTCATCGGAAGCCGGACTTCAGTGCTGGATGGAGAAAATGATGCCGATGCCAATGTGAAAGATGTGACAATAGAAAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGGTATCTCATGGGAAGAGGTATGGTTTGGTGGGGCCCAATGGAAAGGGCAAGTCCACACTATTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCAATTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTCTTGAAGAAAGTGGAGACAAGGATGATGGTTATGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTGATGGGATCTGACGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGCTTAGGTTTTACAAAGGATATGCAGGGCCGAGCTACAAAATCATTTAGCGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCACTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGATCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTCGTCTCACATGATAGGGATTTCCTAAATACTGTTTGCAATGAAATTATTCATCTGCATGATATGAAGCTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGCTGAAAGCTGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTCAAGGATCGAGCTAAGTTTGCTGCTTCTAAGGAAGCAGCAAAAAGCAAGGGCAAGGGCAAGGTTGATGAGGATGAAGCCCCAGCAGAGGTTCCCCAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCAAATCGACCGGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTGGCCATTGTTGGGCCTAACGGAGCTGGGAAATCGACACTGCTGAATCTTCTTGCTGGTGACTTGACTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACCATGGATGAAACACCTGTTCAGTATCTTCTTCGGCTCCATCCAGATCAGGAAGGACTCAGTAAGCAAGAAGCCGTCCGAGCGAAACTCGGTAAGTTTGGATTGCCTAGCCATAATCATCTCACCCCTATTGTCAAGCTATCGGGAGGGCAGAAAGCTCGGGTGGTGTTCACATCAATATCCATGTCAAAGCCCCACATTTTGCTATTGGATGAACCAACTAATCATCTGGATATGCAAAGTATTGACGCGTTAGCTGATGCATTGGATGAATTCACCGGTGGAGTAGTTCTTGTTAGTCATGATTCTAGATTGATATCACGTGTATGTGACGATGAAGAGAGGAGTCAAATATGGGTAGTTGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGGACGAGCTGTTGAAAGAAATTAAAGCTGAAGTTGATGATTAA 2283 0.4437 MGSRGNHILTLLRIHPAKEEAGQTVNFVPAKEHLGRHQRSFAMGRKKSEEAGPATKAKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKKSAPKVSAYTDGIDLPPSDDEDEEVMEEEQEQNSVPKQSTLQQKPDLKPLDVAISDKELKKREKKDLLAAHTAELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKVSHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTAIEAVVSANEELVKTRQEVALLQNASSLEESGDKDDGYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDMKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQLKAAKRSGNRVQQEKVKDRAKFAASKEAAKSKGKGKVDEDEAPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLTPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVKFFDGTFEDYKDELLKEIKAEVDD 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0335 760 MobiDBLite consensus disorder prediction 18 138 - -
Acco03g0335 760 Pfam ABC transporter 216 386 IPR003439 GO:0005524
Acco03g0335 760 ProSitePatterns ABC transporters family signature. 358 372 IPR017871 GO:0005524|GO:0016887
Acco03g0335 760 Coils Coil 450 470 - -
Acco03g0335 760 CDD ABCF_EF-3 533 735 - -
Acco03g0335 760 Gene3D - 198 486 IPR027417 -
Acco03g0335 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 748 IPR027417 -
Acco03g0335 760 FunFam ABC transporter F family member 4 199 482 - -
Acco03g0335 760 CDD ABCF_EF-3 201 429 - -
Acco03g0335 760 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 201 461 IPR003439 GO:0005524
Acco03g0335 760 Pfam ABC transporter 550 685 IPR003439 GO:0005524
Acco03g0335 760 FunFam ABC transporter F family member 4 498 760 - -
Acco03g0335 760 MobiDBLite consensus disorder prediction 32 57 - -
Acco03g0335 760 MobiDBLite consensus disorder prediction 468 508 - -
Acco03g0335 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 446 IPR027417 -
Acco03g0335 760 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 533 758 IPR003439 GO:0005524
Acco03g0335 760 Coils Coil 277 297 - -
Acco03g0335 760 Gene3D - 497 759 IPR027417 -
Acco03g0335 760 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 175 754 - -
Acco03g0335 760 MobiDBLite consensus disorder prediction 104 118 - -
Acco03g0335 760 SMART AAA_5 559 735 IPR003593 GO:0016887
Acco03g0335 760 SMART AAA_5 225 440 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0335 Acco-ChrAcco03 4142981 4146680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0335 533 736 Calmodulin-binding Proteins AT2G36910 28.700 9.90e-13 70.1