Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0321 ATGGAGAATTTTCCTTCTTCGGATCATAGAAAGTTAGTCGAGGAACTGGTGAGGGGCCGTGACCTTGCCGCCCAGCTCCTCCTTGCCGTCAAATCCCGCGGCGAAGGAACGGCGGCATCTCTGCAAGATCTTGTGGATAAGTTGCTGACCTCCTATTCCTACTCCCTTTCGGTCTTGGAGAATACCTCTCACGATTCCCAGATGCACAGAATGGGAAGATCCCGTTGCCTCAATGAAGGACCATGGACTCCTGAGGAAGATGAGAAGCTTGTTCAGTACATTCAGAAACACGACCATGGAAGTTGGAGAGCAATTCCTAAGCCAGCTGCTCTCTCAGTATTTGGTCTGAATAGAAGTGGAAAAAGCTGTAGGCCAAGGTGGCTCACTTATTTGAGGCCTGACATTGATAGAGGCAATTTTTCTCAAGAAGAAGAGCAGACCATACTGCATCTTTATTCCATCCTTGGAAACAAATGGTCAGCAATTGCATCCCATCTTCCGGGGAGGACTGATAACGAGATCAAGGAGTTCTGGAGCGCACATATAAAGAGGAAGTTTATTCCACCGATTGGAACGACACTTGAAGATGAGATGACAGAGATATCACTGCCCAACTTGAGCCGGAAAAGAGATTTTATCAGACTGTTGTTGAATTATCCAATGAGAACCGTGCATGATGGCGAACTCAAGGTTTGGATTCGCGAAGCTTCAAATAGGAGTCATTCTCTGGATGATTTGAATCGCCTTCTTAGTCAAAAGCCGCTTAAATGCTTCCAAGGCCTTTTACCAATGTACATATTGGAGAATGCAGAAAGAGATTGGAGTCCCGTATATGCTGATTCCAACGTGACACCACAAGACATTCTCAGTTTATCTGTTAATCTTGCTGTGGATCAACTGATTCAAACTTTGATGTTTGAGGATGATCATGTACGCGGCATTCATCATGTCTTGTTCTCTACTAGAGATGCAGCTGAAAAAAGACTAGTTAAGGAAAAAATAGAATCAGTCTTGAAAGACCAGAAAATTATGCTTCACCTTCACGAAACCTTCACGCAAGTCTTACTTATTGATGCTTCAAATTCCCATGGTCTGCCTGCGGAGGTCCATGTTCAACATCAGATAGCTCAACAACTTCATCTTCCAATGGTAGAAGGCAATGACGATTTGCTTATAACAAGTATTGAAAAGGAGATGTCCGAAAAAAGATACTTGGTGCTTTTGGTGGATGGAGAAGCCAAAGAGCTTCTTGATCCTCTCGAAGTGGGTATTCCTGAAGAACTTGCAGGAGCTGTGGTGTGCATTACTTCGAAGGAGGCTAATAATGAATTAACAACGACAATGGATCTGAATATCAGCACAAAGGACCACTTGCTGCCATGGAAAGTTTTTTGTGCAAATATTGGCCTTGCAATTTCACAATCAGAGTATACTATGACAATGGCCGCGCGTATAGTTAAAGAATGTGGTGGTCATCTACTTGCAGGAGCCATTGTAGCAAAATCTCTAAGGAATGCAAAACATGAAGATTGGGAACATGCTCTATACAAATTGCGTTCGCTTCATTCTTCCTATGACAGTGATATGTTTCAAGGCCAGAGCAACGTCTTGCTTAAAGCATTCATAAACTTCATCTGGCATGATTTATGTAAGACACAAAAGTATTGTCTTACATCATGTTTATTCATTCCTAAATTTGGGAAGCTTGAAAATGAGTTGATCAACGATTGGATTTCTTCTCGATTGGTGGTTGCTAGTGAAGCAGAGCATACTTTGAGAGAGCTAGTAGACCGTTTTGCTTTATTGCAATTAGAGGACACCAAGTCAAGGTATATTCAAATTCCAGAAGACACATATTCTGTCTTGCAATTATTAAACGCTCAGAATCCTTTGTTCCTGAAAAAATCTGAGTTAGGGTTGGTTGAAGCACCAAATAGTGAGCTATGGCATAGTGCTATATATATTGAGTTGGCAAACAATAAGCTGCCTGAGCTACCTTCGTGCCCGGATTGTCATGAACTCAAAGTGTTGAAGTTGCACAACAATGATGAGCTGACGAAAATCCCACCCCTGTTCTTCTTTAAAATGCCTCTACTTTGCATCTTGGACCTATCCTACACTAGTGTTAGGATGCTGCCGAACTCCTTTTTTGAGTTGGGGCAACTTAGAGAACTCTACATGAAATCTTGTGAATGCTTTATGAAACTGTCCTCAGAGATTGGAAAATTGAAGAATCTAGAGCAGATTGATCTTGACAAAACTCATATTACACATTTGCCAAAAGAGATCCAGGAGTTGACCAATCTCCAAAGTTTGACTCTTTCTTTGTTTGAGTATCGCAGCAGGAAAAGTAAAGAATATACGAGCTCAACAATTATTCCTTCTGGAGTGATTTCAAAACTCAAGGGCCTAAAACATTTAAGGATTGATGTAAACCCTGATGATGAGGGGTGGGAAGAAAATTTACAAGTCATTCTACCAGAAGTCTTGGTATTAGAATGCCTACAAACTATTAGTTTGTACATTCCAGCACCTGAACTTTTAAATCTCATACCTCCACGCATTTTTGAGCTTGATTTTAGATTCACTGTTGGCAAACATATGTCACGGATCATTTCAGGGGGGTCTTCAAGTGTAACAAATTCCTCCATGAGCAATCAGGTCAACCTGAGGACTCAATCTAGGGTAGACGATGATATTAACTATCATCCAGATCCGTTTAAATCTACCGCGCATCCTTCTCATAGGATGATGATCATGGATCTAATTGCTAATGCAAGCATCAGGAGAAGCGACTGCGATGCTAACACACAAGCCTCCTGTGTGACAAATCCTGCTACTGTTTACAGTATAAATCAGAGTGCCAGTGGACCATCCTATTCAGATTTTATGGCATTTCCTACTCTTGAAAGTTGGCAAAAATCTTCAGGCATTGAAACTGATGAATTAAGCGTTGACTCAAATGTTTACAGTATAAATCAGAGGGGCGAGTCAGCATCCAATTCAGATCTTAAAGAGCCATTTTCTTCTATGGGATGTTGGATTGAACCTTCAGCCTTTTGA 3063 0.414 MENFPSSDHRKLVEELVRGRDLAAQLLLAVKSRGEGTAASLQDLVDKLLTSYSYSLSVLENTSHDSQMHRMGRSRCLNEGPWTPEEDEKLVQYIQKHDHGSWRAIPKPAALSVFGLNRSGKSCRPRWLTYLRPDIDRGNFSQEEEQTILHLYSILGNKWSAIASHLPGRTDNEIKEFWSAHIKRKFIPPIGTTLEDEMTEISLPNLSRKRDFIRLLLNYPMRTVHDGELKVWIREASNRSHSLDDLNRLLSQKPLKCFQGLLPMYILENAERDWSPVYADSNVTPQDILSLSVNLAVDQLIQTLMFEDDHVRGIHHVLFSTRDAAEKRLVKEKIESVLKDQKIMLHLHETFTQVLLIDASNSHGLPAEVHVQHQIAQQLHLPMVEGNDDLLITSIEKEMSEKRYLVLLVDGEAKELLDPLEVGIPEELAGAVVCITSKEANNELTTTMDLNISTKDHLLPWKVFCANIGLAISQSEYTMTMAARIVKECGGHLLAGAIVAKSLRNAKHEDWEHALYKLRSLHSSYDSDMFQGQSNVLLKAFINFIWHDLCKTQKYCLTSCLFIPKFGKLENELINDWISSRLVVASEAEHTLRELVDRFALLQLEDTKSRYIQIPEDTYSVLQLLNAQNPLFLKKSELGLVEAPNSELWHSAIYIELANNKLPELPSCPDCHELKVLKLHNNDELTKIPPLFFFKMPLLCILDLSYTSVRMLPNSFFELGQLRELYMKSCECFMKLSSEIGKLKNLEQIDLDKTHITHLPKEIQELTNLQSLTLSLFEYRSRKSKEYTSSTIIPSGVISKLKGLKHLRIDVNPDDEGWEENLQVILPEVLVLECLQTISLYIPAPELLNLIPPRIFELDFRFTVGKHMSRIISGGSSSVTNSSMSNQVNLRTQSRVDDDINYHPDPFKSTAHPSHRMMIMDLIANASIRRSDCDANTQASCVTNPATVYSINQSASGPSYSDFMAFPTLESWQKSSGIETDELSVDSNVYSINQRGESASNSDLKEPFSSMGCWIEPSAF 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0321 1020 CDD SANT 139 178 IPR001005 -
Acco03g0321 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 560 IPR027417 -
Acco03g0321 1020 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 186 IPR017930 -
Acco03g0321 1020 ProSiteProfiles Myb-like domain profile. 132 182 IPR001005 -
Acco03g0321 1020 Gene3D - 139 185 - -
Acco03g0321 1020 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 131 IPR017930 -
Acco03g0321 1020 Gene3D - 460 529 IPR042197 -
Acco03g0321 1020 FunFam MYB-related transcription factor 78 136 - -
Acco03g0321 1020 Coils Coil 585 605 - -
Acco03g0321 1020 Gene3D Ribonuclease Inhibitor 627 978 IPR032675 -
Acco03g0321 1020 Gene3D - 79 136 - -
Acco03g0321 1020 Pfam NB-ARC domain 368 521 IPR002182 GO:0043531
Acco03g0321 1020 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 71 189 - -
Acco03g0321 1020 SUPERFAMILY Homeodomain-like 79 178 IPR009057 -
Acco03g0321 1020 Pfam Myb-like DNA-binding domain 82 147 - -
Acco03g0321 1020 Pfam Leucine rich repeat 673 730 IPR001611 GO:0005515
Acco03g0321 1020 SUPERFAMILY L domain-like 628 839 - -
Acco03g0321 1020 SMART sant 78 133 IPR001005 -
Acco03g0321 1020 SMART sant 136 184 IPR001005 -
Acco03g0321 1020 CDD SANT 81 131 IPR001005 -
Acco03g0321 1020 ProSiteProfiles Myb-like domain profile. 74 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0321 Acco-ChrAcco03 3898695 3903671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0321 71 187 MYB Transcription Factor Family AT1G34670 69.672 2.14e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco03g0321 NB-ARC 6.2e-07 CL0023