Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0318 ATGGATATCTTAATCCAAGATCATTCAAATGATAAACATGTCCAATTGCCGGAGGACGCAGATGCTATTTTGCATTCATTGATCACTCCAACCCCTTTCTTCATCAGGAAATCTGGATTAGGGTTGACGGAACCACCAAAGGATGAGGCATGGCATAGTGTCGAACGTATGGAACTTGCAAACAATAAGCTATCTGAGCTTCCTTTGTCGCCAAGCAGCCCTGTACTCAAAGTGTTAATGTTGCAGGGAAATGTTGATTTAATAAGAATCCCAAGTATGTTTTTCTTGAAAATGCCCTTGCTTAACATCCTGGACTTATCTTATACTAGTTTACGAGAACTACCGGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATTTTTTTGAAAGGTTGTGGATGTTTCATGAAATTATCACCAAAGATTGGAAAATTGAAGAAGCTCGAGAAGCTTGATCTTGATGGAACTCAGATCATACATTTGCCAGAAGAGATTCAAGAGCTAACCAACCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGTGGCAGAAAAGGCAAGAAATATACGAGCTCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAAGGATTGATGTGAACCCTGATGATGAGCGGTGACACTATTACAAATGCTCTTATGAAGGTTGCCCGGTTAGAAAGAGAGTGCATCGATGTGAAGAAGACCTAACAAAGATTGACATCTGTTATGAGGGAAGACACGTGCATCCATGCCTCGTGGATATCATATCCCATCATGAACTACATTCCAGAGGGATAGTGAGTGAGCCACTACAATCTTCTAGTGCAACAAATTCCTACGTGAATAATCATGTTGACGTGAAGACTCGATTTGGTGTAGATGATATTGACGTCCATTCAGACGAGCCATTACGACCTTCCAATGACATAAAGCATTCTCGTAGGAGAAGAGCCATCTCAACATGGAAAGAACAATATGAGTCTATTGAAGATGGATATGGTTGGAGGAAATATGGCCAGTGGTTGTGTATGAGAAGCGACACTTGCACAGAAGCCTCCCCTGTGACAAATCCTGTTATGCTTTACAGTATAAAGCAGACTATCAATTCTGATCTTGAATCATTTTCTTCTATGGGAGGTTGGATTGAACCTTCCGGCAATGAAACTTATGGCCACGGTGTTGACACAATTATCTAG 1218 0.4064 MDILIQDHSNDKHVQLPEDADAILHSLITPTPFFIRKSGLGLTEPPKDEAWHSVERMELANNKLSELPLSPSSPVLKVLMLQGNVDLIRIPSMFFLKMPLLNILDLSYTSLRELPDSLFELEQLREIFLKGCGCFMKLSPKIGKLKKLEKLDLDGTQIIHLPEEIQELTNLQSLFLCFYEYRGRKGKKYTSSTIIPSEVISKLKGLKHLRIDVNPDDERXHYYKCSYEGCPVRKRVHRCEEDLTKIDICYEGRHVHPCLVDIISHHELHSRGIVSEPLQSSSATNSYVNNHVDVKTRFGVDDIDVHSDEPLRPSNDIKHSRRRRAISTWKEQYESIEDGYGWRKYGQWLCMRSDTCTEASPVTNPVMLYSIKQTINSDLESFSSMGGWIEPSGNETYGHGVDTII 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0318 405 SUPERFAMILY L domain-like 7 215 - -
Acco03g0318 405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 44 214 - -
Acco03g0318 405 Pfam WRKY DNA -binding domain 217 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0318 405 SMART LRR_typ_2 98 121 IPR003591 -
Acco03g0318 405 SMART LRR_typ_2 145 168 IPR003591 -
Acco03g0318 405 Gene3D Ribonuclease Inhibitor 34 183 IPR032675 -
Acco03g0318 405 Gene3D WRKY domain 184 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0318 405 ProSiteProfiles WRKY domain profile. 222 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0318 405 SMART WRKY_cls 202 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0318 405 Pfam Leucine rich repeat 75 132 IPR001611 GO:0005515
Acco03g0318 405 SUPERFAMILY WRKY DNA-binding domain 219 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0318 Acco-ChrAcco03 3883375 3886615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0318 205 262 WRKY Transcription Factor Family AT5G64810 39.655 7.99e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g0318 LRR_8 8.5e-08 CL0022