Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0314 ATGAATACCTTAATCCAAGATCATTCAAATGATAAGGATGTCCAATTGCTGGAGGACACTAGTGTTATTTTTCATTCATTGAACACCTCAACCCCCTTCTTAATCAACCAGTCTGGATTAGGGTTGACGGAACCACCAAGGGATGAGGCATGGCATAGTGTCAAACATATGCAACTTGCAAACAATAAACTATCTGACCTTCCTTTGTCACCAAGCAGCCCTGTACTCAAAGTGTTAATGTTGCAGGGAAATGTTGATTTAATAAGAATCCCAAATACGTTTTTCTTGAAAATGCCCTTACTTAAGATCCTGGACTTATCTTACACTAGTTTACGGGAACTACCTGACTCACTTTTTGAGTTGGAGCAGCTCAGAGAAATGTTTTTGAAAGGTTGTGAATGTTTCATGAAATTATCACCAAAGATTGGAAAATTGAAGAAGCTCCAGAAGCTTGATCTTGATGGAACTCAGATCACACATTTGCCAGAAGAGATTCAAGAGCTAACCAACCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGTGGCAGAAAAGGCAAGAAATATACGAGCTCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGCTAAAACATTTAAGGATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACAAGGCATTATTCCAGAAATATTGGGATTAGAGCATTTATGTAGCAGGAAGGATGAATCAGAGAAGAAGACAGTGATGGTTCCAGCACTTCGGTTTGGTAACACGGAGATTCCACCAGAGGATGGGTACACTTGGAGAAAATATGGCCAGAAAGAGATCCTCGGTTCTTCTTACCCCAGGAGTTACTTCAGGTGCGCCCAACAGAATTTATATCAATGTCCAGCGAAGAAACAAGTGCAGAGTCTGGATAGTAACCCTGACATATTTGCAGTGACATATAGATGCAGCCACACGTGCCACTTGTCGTCCACAGCTCGATCTTCATCAATTCCTCCACAACTAATATTAGGTAAAACAGGTGAGATAGGGACTAGGGAGACACTGGATCCTTTCAATGACAAGGTTGACAAGGATAAGAGCCTACCTTCTTCTCTCACTCCTCCCAACATTCTTCTCCTGGTTTTCTTGCTCTGGTTCTTTCTCTCTTGCTTCCCTGAACTTAGGGAAACAAGCAGAGCTGAAGGAAAGAGGAGCTCGAGGCACAAGAAAGAGGAAGAGGAAGCCGACGGCGATGAAGAAGAGACAGAGAATGAAGTTGACTCTGGAGAAGAACATGGCAGAAAGAGATGGGTTCCATCAAATACATACAACAGGAGAGGCCCCAAACACGGATGCTCCTCGGCGGTGCCACCGTGTTGTCGGGCCGATGATTGCCAGACTGATCTGAGCGGTGCCAAACAGTATCATCGGCGGCACAAGGTCTGTGAGTACCACGCTAAAGCATCGGTCGTACTCATTTCAGGGAATCAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAATCGAAGTTGTAGAAGACGTTTGGCAGGGCATAATGAGAGAAGGCTAAAGGTTTCATCTGATTATCATGGAGAAGACTTCAAGCCAAAACTAGATGTCCGTTCAAAGCATTATATTATTGCACAAAATCGAGTAGGTCATGATATTCATGGAAGTGGCTCAAAGTTTCCACTTGCTAATATGGACGTGGGGTCAAATTTGACGATTTAA 1749 0.43 MNTLIQDHSNDKDVQLLEDTSVIFHSLNTSTPFLINQSGLGLTEPPRDEAWHSVKHMQLANNKLSDLPLSPSSPVLKVLMLQGNVDLIRIPNTFFLKMPLLKILDLSYTSLRELPDSLFELEQLREMFLKGCECFMKLSPKIGKLKKLQKLDLDGTQITHLPEEIQELTNLQSLFLCFYEYRGRKGKKYTSSTIIPSEVISKLKGLKHLRIDVNPDDERWYENVQGIIPEILGLEHLCSRKDESEKKTVMVPALRFGNTEIPPEDGYTWRKYGQKEILGSSYPRSYFRCAQQNLYQCPAKKQVQSLDSNPDIFAVTYRCSHTCHLSSTARSSSIPPQLILGKTGEIGTRETLDPFNDKVDKDKSLPSSLTPPNILLLVFLLWFFLSCFPELRETSRAEGKRSSRHKKEEEEADGDEEETENEVDSGEEHGRKRWVPSNTYNRRGPKHGCSSAVPPCCRADDCQTDLSGAKQYHRRHKVCEYHAKASVVLISGNQQRFCQQCSRFHELSEFDNSNRSCRRRLAGHNERRLKVSSDYHGEDFKPKLDVRSKHYIIAQNRVGHDIHGSGSKFPLANMDVGSNLTI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0314 582 Gene3D WRKY domain 252 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0314 582 Pfam SBP domain 457 529 IPR004333 GO:0003677
Acco03g0314 582 Pfam Leucine rich repeat 75 132 IPR001611 GO:0005515
Acco03g0314 582 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 405 530 IPR044817 GO:0003677
Acco03g0314 582 ProSiteProfiles WRKY domain profile. 264 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0314 582 Pfam WRKY DNA -binding domain 264 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0314 582 SMART LRR_typ_2 98 121 IPR003591 -
Acco03g0314 582 SMART LRR_typ_2 145 168 IPR003591 -
Acco03g0314 582 Gene3D - 453 518 IPR036893 GO:0003677|GO:0005634
Acco03g0314 582 MobiDBLite consensus disorder prediction 396 451 - -
Acco03g0314 582 SUPERFAMILY WRKY DNA-binding domain 260 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0314 582 Gene3D Ribonuclease Inhibitor 3 241 IPR032675 -
Acco03g0314 582 SUPERFAMILY L domain-like 35 215 - -
Acco03g0314 582 SMART WRKY_cls 263 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0314 582 SUPERFAMILY SBT domain 455 535 IPR036893 GO:0003677|GO:0005634
Acco03g0314 582 MobiDBLite consensus disorder prediction 396 411 - -
Acco03g0314 582 ProSiteProfiles Zinc finger SBP-type profile. 454 531 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0314 Acco-ChrAcco03 3842478 3852482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0314 240 339 WRKY Transcription Factor Family AT2G40740 62.000 7.15e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco03g0314 SBP 2.3e-30 No_clan