Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0305 ATGTTAAATACCATCACAACACGGGGGATAGTGGACGAGCCAGTACGACCTTCCAATGATGAGGTCCTCAAGAACAAAAAGCATTCTCATAGATGCACTCACAGAAATAATGAAGGTTGCCTAGCGACCAAACAGGTACAGAGAGTTGACAATGAGCCTTTCGTCTACCGGATCACCTATCATGGTCATCACACTTGCACACAGAGCTCCACTGTACCAAATTCCTCCACGCACAATCAAATCGACTTAAGCTCTCGATCTGGAGTAGATGATGATCATGTTCACAATCATCCGACGTTAAAATCTACAGCATTACGGCGGCCTTCTGGAATGAAGATCATCACAGATCGAAAGCAAATTGCTAACAGAAGCAACAGTGAATTTGCCAAGCGGTGTGGGTTCTCAATTCGGCGACATCGTACAGAGGGAAAAGATGGCGTTGGAAAAGGACTAACCAGGCGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTGAAAACATCAACTGAAAGTAAACCCCAAAGAAATCGAAAATCTTCCCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAAACAATGGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCAAATCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCAGATTCAGACAAATGCCGAATCTTGATGCAGTTTTCTTTTGCTTTCTTTGTTTCATCGTCTTCTTGGAAGGCTTTCTTAGGGTTTATGAATGGGAAGGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTTAAAGAAGCATTAGCCATTGAAATGCCAGCAACTAAACATGCTTTCTGCATATGGATGATTGTAGCTAAATTTCCTTCTTGGCTTAGTGCTGTTCTAGGAGAATGTTACAATGAATGGAAGGCTGAATTTTATAGACTATACAATCTTGAGTCAATTGAGGATTTTGAACTAGGTTGGAGAGATGTGGTCAGTTCTTTTGGACTGCATGCCAGTAGGCACATTGCTAATTTATATACTTTACGTTCGCTTTGGGCATTGCCATTTCTAAGAAGTCATTTTTTTGCTGGAATGACTATAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAGCGATTTCTGAGTGCGCAGACCCGGCTTGCACACTTTGTGGAGCAGCCGTTGCTGTGGATTTCAAAGATCAAACTGGAGAACAACATGCAACAGAATCTTCAAAATATTTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCAACTATCCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAACAACTTGTATTGGCTGCTCATTATGCATATTTTCCATTGGAAGATGGCTTCCTTGTGAGGCACCATACAAAATCCGAGGAAGGTCGTAGGGTGTATTGGGGTCCTCGGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGTCGGCATGCTCTTAGAGTTCTTTCAACTGGAAACTGCTTTCAGATCCCAGATAGATATCTTCCCTCCCGTTGGCGTCGAATCAGCATGACTTCTGCCAGGCTTCTTCAGAGTGCACCTAAGGATCATGCTGAAGGAGTGCAGTTATTACAAAACATGGTTTCTGCTCTTATCACAGAATCTTCCAAGTCAAAGGAAAGATTGGATATTGCCACAGAGCAGGTTTCCCTCCTTCTATCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTTAGAGATATTCCTGGCATTGGTAGGAATCTTTGA 1815 0.4253 MLNTITTRGIVDEPVRPSNDEVLKNKKHSHRCTHRNNEGCLATKQVQRVDNEPFVYRITYHGHHTCTQSSTVPNSSTHNQIDLSSRSGVDDDHVHNHPTLKSTALRRPSGMKIITDRKQIANRSNSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTMELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKCRILMQFSFAFFVSSSSWKAFLGFMNGKAPQTILTDQNMCLKEALAIEMPATKHAFCIWMIVAKFPSWLSAVLGECYNEWKAEFYRLYNLESIEDFELGWRDVVSSFGLHASRHIANLYTLRSLWALPFLRSHFFAGMTITGQSKSINAFIQRFLSAQTRLAHFVEQPLLWISKIKLENNMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYAYFPLEDGFLVRHHTKSEEGRRVYWGPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSARLLQSAPKDHAEGVQLLQNMVSALITESSKSKERLDIATEQVSLLLSRIREQPVSLQGVRDIPGIGRNL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0305 604 ProSiteProfiles WRKY domain profile. 25 64 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0305 604 Gene3D WRKY domain 19 69 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0305 604 Pfam WRKY DNA -binding domain 25 66 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0305 604 ProSiteProfiles Zinc finger SWIM-type profile. 466 514 IPR007527 GO:0008270
Acco03g0305 604 SMART 26again6 489 516 IPR006564 GO:0008270
Acco03g0305 604 MobiDBLite consensus disorder prediction 85 99 - -
Acco03g0305 604 MobiDBLite consensus disorder prediction 67 84 - -
Acco03g0305 604 Pfam SWIM zinc finger 480 512 IPR007527 GO:0008270
Acco03g0305 604 SUPERFAMILY WRKY DNA-binding domain 27 68 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0305 604 Pfam FAR1 DNA-binding domain 127 216 IPR004330 -
Acco03g0305 604 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 108 576 IPR031052 GO:0006355
Acco03g0305 604 MobiDBLite consensus disorder prediction 1 30 - -
Acco03g0305 604 Pfam MULE transposase domain 253 298 IPR018289 -
Acco03g0305 604 SMART WRKY_cls 18 68 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0305 604 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0305 Acco-ChrAcco03 3753738 3759683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0305 31 107 WRKY Transcription Factor Family AT3G56400 41.250 9.13e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco03g0305 FAR1 2.3e-16 CL0274