Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0304 ATGGATGCCTTAATTCAAGATCATTCAAATGATAAGTATGTCCAATTGCTGGAGGACACTCGTGCTATTTTTCATTCATTGAACACCTCAACCCCCCTCTTAATCAACCAGTCTGGATTAGGGTTGACGGAACCACCAAAGGATGAGGCATGGCATAGTGTCAAACGTATGCAACTCGCAAACAATAAACTATCTGACCTTCCTTTGTCACCAAGCAGCCCTGTACTCAAAGTGTTAATGTTGCAGGGAAATGTTGATTTAACAAGAATCCCAAATACATTTTTCTTGAAAATGCCCTTACTTAAGATCCTGGACTTATCTTACACTAGTTTACGGGAACTACCTGACTCATTTTTTGAGTTGGAGCAGCTCAGAGAAATGATTTTGAAAGGTTGTGAATGTTTCATGAAATTATCACCAAAGATTGGAAAATTGAAGAAGCTCAAGAAGCTTGATCTTGATGGAACTCAGATCATACATTTGCCAGAAGAGATTCAAGAGCTAACCAACCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCATGGCAGAAAAGGCAAGCAATATACGAGCTCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAAGGATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGCACAAGGCATTATTCCAGAAATATTGGGATTGGAGCATTTGAAGGATGAAGCAGAGAAGATGACATCGATGGTTCCAGCACCTCGGTTCGGTAACACGGAGATTCCACCAGAGGATGGGTACACTTGGAGAAAATATGGCCAGAAAGAGATCCCCGGCTCTATTTATCCCAGGAGTTACTTCAAGTGCACCCACCAGAAGTTATATCGATGCCCAGCGAAGAAACACGTGCAGCGTCTGGATAGTAACCCAAACATATTTGCAGTGACATACAGCGGCAGCCACACGTGTCGCTTGTCGTCCACAACTCCATCTTCATCAGCTCCACCACAACTGATATTAGGTAAAACAGGTGAGACAGTGACTAGTGAGACACTGGATCCTTCCAATGACAAGGTTGACAAGGATAGGAGAGATGCCTCCTCACGATGGACAGAGAGTGAGGTCTTTGATAATGCCTCCAATACTGACTTTGCTTCCGCCCCATCTTGTGAAGATACTATAGTGAAAGAACCATATGACTCCTATCCTGAATCAATTTCTTCTGTTTACAGTTTCGAATCTGACATCGACTCTCTCTCCGATAATAGTGACGTTGACTCTCTCTCCGACAACAGTGACTGGCAGATTTTTCCTTAA 1308 0.4243 MDALIQDHSNDKYVQLLEDTRAIFHSLNTSTPLLINQSGLGLTEPPKDEAWHSVKRMQLANNKLSDLPLSPSSPVLKVLMLQGNVDLTRIPNTFFLKMPLLKILDLSYTSLRELPDSFFELEQLREMILKGCECFMKLSPKIGKLKKLKKLDLDGTQIIHLPEEIQELTNLQSLFLCFYEYHGRKGKQYTSSTIIPSEVISKLKGLKHLRIDVNPDDERWYENAQGIIPEILGLEHLKDEAEKMTSMVPAPRFGNTEIPPEDGYTWRKYGQKEIPGSIYPRSYFKCTHQKLYRCPAKKHVQRLDSNPNIFAVTYSGSHTCRLSSTTPSSSAPPQLILGKTGETVTSETLDPSNDKVDKDRRDASSRWTESEVFDNASNTDFASAPSCEDTIVKEPYDSYPESISSVYSFESDIDSLSDNSDVDSLSDNSDWQIFP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0304 435 SUPERFAMILY WRKY DNA-binding domain 258 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0304 435 SUPERFAMILY L domain-like 34 215 - -
Acco03g0304 435 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 216 399 IPR044810 GO:0003700
Acco03g0304 435 SMART LRR_typ_2 98 121 IPR003591 -
Acco03g0304 435 SMART LRR_typ_2 145 168 IPR003591 -
Acco03g0304 435 Pfam WRKY DNA -binding domain 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0304 435 MobiDBLite consensus disorder prediction 416 435 - -
Acco03g0304 435 SMART WRKY_cls 260 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0304 435 ProSiteProfiles WRKY domain profile. 261 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0304 435 MobiDBLite consensus disorder prediction 323 368 - -
Acco03g0304 435 Gene3D Ribonuclease Inhibitor 5 246 IPR032675 -
Acco03g0304 435 Pfam Leucine rich repeat 75 132 IPR001611 GO:0005515
Acco03g0304 435 MobiDBLite consensus disorder prediction 351 368 - -
Acco03g0304 435 MobiDBLite consensus disorder prediction 323 350 - -
Acco03g0304 435 Gene3D WRKY domain 252 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0304 Acco-ChrAcco03 3746292 3750120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0304 238 336 WRKY Transcription Factor Family AT2G40740 61.616 2.15e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g0304 WRKY 5.9e-25 CL0274