Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0299 ATGGTAATCCAAGATCATTCAAATGATAAGCATGTCCAATTGCCGGAGGACACAGATGCTGTGTTGCATTCATTGAACACTCCAACCCCTTTATTCATCAGGAAATCTGGATTAGGGTTGACGGAACCACCAAAGGATGAGGCATGGCATAGTGTTGTGCGTATGCAACTTGCAAACAATGAACTATCTGAGCTTCCTTTGTCTCCAAGCAGCCCTGAACTCAAAGTGTTAATGTTGCAAGGAAATATCGAGTTAACAAGAATCCCAAATACGTTTTTCTGTAAAATGCCCTTGCTTTCGATCCTAGACTTATCTTACACCAGTGTAAGAGAATTACCAGGCTCTCTTTTTGAGTTGGAGCAGCTCAGACAACTGTATTTGAAAGGCTGTGAATGTTTCATGAAATTATCACCAAAGATTGGAAAATTGAAGAAGCTCGAGAAGCTTGATCTTGATGGAACTCATATCATACATCTGCCAGAAGAGATTCAAGAGCTAACCAATCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGTGGCAGAAAAGGCAAGCAATATACGAGCTCAACAATTATTCCATCTGAAGTAATCTCAAAACTCAAGGGGTTAAAACATTTAGGCATTGATGTAAACCCTGATGATGAGCGGTGGAGGGATGAAGCAGAGAGGACATTGATGGTTCCAGCACCTCGGTTTGGCAACACGGAGATTCCACCAGAGGATGGGTACACTTGGAGAAAATATGACCGGAGAGACATCCTCGGCTCTATTTACCCCAGGAATTACTTCAGGTGCACCCACTGGAATTTATATCGATGCCCAACAAGGAAAAAAGTGCAGCGTTTGGATAGTAACCCTAACATATTTGCAGTGACATATAGAGGCAGGCACACGTGCCACTTGTCGTCCACAGCTCCATTTTCATCAGTTCCACCACAACAAATATTAGGTAAAACAGGTGAGATAGTGACTAGTGAGACAATGGGTCCTTCCAATGGCAAGGTTGACAAGGATTGGAGAGACTATTACAAATGCTCTTATGAACATTGCCCGGCTAAAAAGAGAGTGCAACGATGTGAAGAAGACCCAAAAATGATTGACATCTGTTGCGAGGGAAAACACGTGCATACATGTGCCCAGAATAACCGATCTCATCATGAACTACAGTCCATAGGGGGAATAGTGAGTGAGCCACTGCAGTCTTCTAGTGCAACAAATTCCTCCGTAGATAATCATGTTGACATGAGGATTCCATTTGGTTTAGATGATATTGACGTCAGTTCAGGGGAGCCATCTCAACATGGACAAAACAATCTGAGTCTATTCAAGACGGATATGGTTGGAAGAAATATGGCTAGAGAGAGATTTTTGGAGCCAAATGTCCAATAAGAGGAATTTATATCGATAGCACAATGA 1419 0.4221 MVIQDHSNDKHVQLPEDTDAVLHSLNTPTPLFIRKSGLGLTEPPKDEAWHSVVRMQLANNELSELPLSPSSPELKVLMLQGNIELTRIPNTFFCKMPLLSILDLSYTSVRELPGSLFELEQLRQLYLKGCECFMKLSPKIGKLKKLEKLDLDGTHIIHLPEEIQELTNLQSLFLCFYEYRGRKGKQYTSSTIIPSEVISKLKGLKHLGIDVNPDDERWRDEAERTLMVPAPRFGNTEIPPEDGYTWRKYDRRDILGSIYPRNYFRCTHWNLYRCPTRKKVQRLDSNPNIFAVTYRGRHTCHLSSTAPFSSVPPQQILGKTGEIVTSETMGPSNGKVDKDWRDYYKCSYEHCPAKKRVQRCEEDPKMIDICCEGKHVHTCAQNNRSHHELQSIGGIVSEPLQSSSATNSSVDNHVDMRIPFGLDDIDVSSGEPSQHGQNNLSLFKTDMVGRNMARERFLEPNVQXEEFISIAQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0299 472 Gene3D WRKY domain 237 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 Gene3D WRKY domain 326 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 ProSiteProfiles WRKY domain profile. 241 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 Pfam Leucine rich repeat 72 130 IPR001611 GO:0005515
Acco03g0299 472 ProSiteProfiles WRKY domain profile. 341 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 SUPERFAMILY WRKY DNA-binding domain 339 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 SUPERFAMILY L domain-like 26 213 - -
Acco03g0299 472 SUPERFAMILY WRKY DNA-binding domain 238 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 Gene3D Ribonuclease Inhibitor 40 236 IPR032675 -
Acco03g0299 472 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 221 303 IPR044810 GO:0003700
Acco03g0299 472 MobiDBLite consensus disorder prediction 422 442 - -
Acco03g0299 472 SMART WRKY_cls 336 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 SMART WRKY_cls 240 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 Pfam WRKY DNA -binding domain 241 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g0299 472 Pfam WRKY DNA -binding domain 337 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0299 Acco-ChrAcco03 3722891 3727720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0299 213 316 WRKY Transcription Factor Family AT2G40740 52.381 1.61e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g0299 WRKY 2.6e-20 CL0274