Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0286 ATGGCATTTATGGCTTCAAATCAGACACCTGGTGGAAACCAAGCAGCAGGGCCAACAAACGATGCCTTGTACAAGGAATTGTGGCATGCTTGTGCTGGTCCCCTTGTCACTCTTCCCCGTGAAGGAGAACGAGTTTATTACTTCCCTCAGGGGCATATGGAACAGCTTGAGGCATCTATGCATCAAGGAGCAGAGCAACAAATGCCTTCCTTCAACTTGCCATCTAAAATTTTATGCAAAGTGGTCAATGTTCTTCTTCGGGCTGAACCTGAGACAGATGAAGTATATGCACAGATAACTTTGCTTCCAGAACCAGATCAAAGCGAGTTGAGTAGTCCAGATGATCCTCTGCCGGAACCTTCAAGATGCACTGTCCATTCATTTTGTAAAACGCTTACTGCATCTGACACCAGCACCCATGGGGGATTTTCTGTTCTTCGGAGACATGCAGATGAATGTTTGCCACCCTTGGACATGTCTCAGCAGCCACCATGGCAAGAATTGGTTGCAACTGATTTGCCTGGAAATGAATGGCATTTTAGACATATTTTTCGAGGTCAACCTAGGCGACACTTACTGACTACTGGGTGGAGTGTCTTTGTCAGTTCCAAGAAATTAGTGGCTGGTGACGCCTTTATATTCCTGAGAGGTGAAAATGGGGAGCTGCGTGTTGGAGTTAGGAGGCTGATGAGACAGCAAAATAACATGCCATCATCTGTTATATCAAGTCATAGTATGCATCTGGGTGTTTTGGCCACTGCATCTCATGCAATTGCTACTGGAACCCTGTTTTCTGTATTTTACAAGCCCAGAACAAGCCGATCTGAGTTCATTGTGAGTGTCAACAAATATCTTGAAGCTAAGAGTCACAAGTTTTCTGTTGGGATGAGATTCAAGATGAGGTTTGAAGGCGATGAAGTTCCTGAAAGAAGGTTTAGTGGTACAATTGTTGGGGTTGGAGATAATATCTCACCTGTCTGGGCTGATTCTGAGTGGCGCTCATTAAAGGTTCAATGGGACGAACCCTCTTCAATCTTGCGGCCTGATAGAGTTTCTTCTTGGGAATTGGAGCCACTTGTGAATACCACCACTCCTGCAAATCCCCAACCAACCCAAAGAAACAAGAGGGCACGTCCTCCCCTGCTACCTTCAGCAGTGCCTGATTCTTTGCATGGTGTCTGGAAATCTGCTAATAAAACTCTGCCATTCTCTTATGGCGATCCCCAACATGCACGAGACCTCTATTCATCATCCAAGTTCAATCCTACTGCTACTAACTTTCTAGGTATTGGTGGGAATAGTCCTATGGGGGCTGTTTCTAATAATGCAACTTGTTGGTCCAATAGAGTGGAGAACCCTTTGGAGTCAATAACCCCTAAAGAATCCAGTGAAAAGAGACAAGGCACTGGAAATGGCTGTAGGCTCTTTGGGATTCAATTACTTGAGAATTCTAATGTCGAAGAAAGTATGCTGCCAATGACATTGTCAGGAAGGGTAGGAGACGATAGGTCTGCTCGTTATGTTGATGCTGAATCTGATCGGCATTCTGAACCATCAAATCTTAATCGTGCTGATGTTCCTTCAATAAGTTGTGATGCTGACAAATCGTGCTTGCAGTCTCCCCCTGAAGCACTGAGCAGGCAAATAAGGAGCTGCACGAAGGTTCACATGCTAGGGGTGGCAGTTGGAAGGGCTGTGGATTTGACTCGGTTTGATGGATATGAAGATCTGCTTCAGAAATTGGAGGAGATGTTTGACCTCAAGGGTGAGCTCTGTGGATCCAGAAAAACTTGGGTGGTTGTCTACACTGACAATGAAGATAATGTGATGATGGTCGGAAATATTCCATGGAACACGTTCTGTAATGCTGTGAGGAAAATTTTCATCTACACTGCAGAGGAGGTGAAGAAGCTTTCGCCCAAAGCGCTACTTTCATTTGGTGAAGAGGCTAAAACAGGCGAGCCAGACTCTGAAGCAGCGGTTAATGCCGAGGACCAGGATCAGTCATCTATTGTGGGGCCTGGTTGTTAA 2031 0.4545 MAFMASNQTPGGNQAAGPTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMHQGAEQQMPSFNLPSKILCKVVNVLLRAEPETDEVYAQITLLPEPDQSELSSPDDPLPEPSRCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVATDLPGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQNNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAKSHKFSVGMRFKMRFEGDEVPERRFSGTIVGVGDNISPVWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVNTTTPANPQPTQRNKRARPPLLPSAVPDSLHGVWKSANKTLPFSYGDPQHARDLYSSSKFNPTATNFLGIGGNSPMGAVSNNATCWSNRVENPLESITPKESSEKRQGTGNGCRLFGIQLLENSNVEESMLPMTLSGRVGDDRSARYVDAESDRHSEPSNLNRADVPSISCDADKSCLQSPPEALSRQIRSCTKVHMLGVAVGRAVDLTRFDGYEDLLQKLEEMFDLKGELCGSRKTWVVVYTDNEDNVMMVGNIPWNTFCNAVRKIFIYTAEEVKKLSPKALLSFGEEAKTGEPDSEAAVNAEDQDQSSIVGPGC 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0286 676 Gene3D - 125 230 IPR015300 -
Acco03g0286 676 Gene3D - 545 639 - -
Acco03g0286 676 Pfam Auxin response factor 254 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco03g0286 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 639 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco03g0286 676 MobiDBLite consensus disorder prediction 360 384 - -
Acco03g0286 676 ProSiteProfiles PB1 domain profile. 550 643 IPR000270 GO:0005515
Acco03g0286 676 MobiDBLite consensus disorder prediction 649 676 - -
Acco03g0286 676 CDD B3_DNA 126 228 IPR003340 GO:0003677
Acco03g0286 676 MobiDBLite consensus disorder prediction 360 374 - -
Acco03g0286 676 Pfam AUX/IAA family 551 586 IPR033389 -
Acco03g0286 676 Pfam AUX/IAA family 597 640 IPR033389 -
Acco03g0286 676 SUPERFAMILY CAD & PB1 domains 552 627 - -
Acco03g0286 676 SUPERFAMILY DNA-binding pseudobarrel domain 117 257 IPR015300 -
Acco03g0286 676 FunFam Auxin response factor 126 230 - -
Acco03g0286 676 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Acco03g0286 676 SMART B3_2 128 230 IPR003340 GO:0003677
Acco03g0286 676 FunFam Auxin response factor 291 363 - -
Acco03g0286 676 Gene3D - 291 364 - -
Acco03g0286 676 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0286 Acco-ChrAcco03 3583564 3588662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0286 5 673 B3 DNA Binding Superfamily AT1G59750 67.756 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco03g0286 B3 5e-19 CL0405