Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0271 ATGGTAAGCATGGAGTCCCTGGATCTTTCCCATAATTATTTGTCTGGCGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATTTACTGCATGGAGAAATTCCAAATGATGGCCCTTTTCAAAATTTTAATGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACATATCAAATAAAGTGATGCTAATGATAAAATGTTTATTGCCTACCATTGTTGCCATGTTGATTGTTTCAGCCATTGTGATTCTAAAGAATAAGAGAGATGATGATGATAATTCAACAAAGAGGGATTTAATAGCTTTGGATACACCAATCAGGATATCCTATTTTGAGCTTCTACGGGGAACAAATGGGTTTGATGAGAGTAACCTTATTGGTTCTGGAAGCTTTGGATCAGTATATAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTAAAAGTGTTTAACTTAGACATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATCTACGCCACCGCAATCTCATTAAGATCATTAGTAGTTGCTCAAATGGTCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGAGAGTCTTGATAAATGGTTATACTCTCATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAACTGCTTTGGAGTATCTTCACCATGGTTCTTCTACACCAGTTGTTCATTGTGATGTCAAGCCAAGCAATGTTTTGTTGGACGAAGATATGATGGCTCATCTTGGTGATTTTGGTATTGCTAAATTGTTTGGTGAAAAACAGTTGGAAATTTATACCAAAACTTTGGCAACAATTGGCTATATAGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCCATCAAAGGAGATGTGTATAGTTTTGGGATTTTGCTAATGGAAATATTTACAAGGAAGAAGCCAACAGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTGGGCAACTCCACGCCACATTCCATCATGTATATTATAGATGTCAATTTACTACAGAGAGAAAATCAAAATACTGATAATATACTACCTTATATGTCATCAGTTTTTGAGTTAGCATTACATTGCTCCACTGAATTACCAGAGGCACGACTTACTATGATTGATGTTGTAGCATCATTGAGAAAAATCAAGTCTTTGTTTATGGAAAATGCTTCACATGCCACTAGTTGA 1296 0.3511 MVSMESLDLSHNYLSGVIPKSLESLLYLKYINLSYNLLHGEIPNDGPFQNFNAQSFMMNKDLCGKSQLQVQPCRKGNKHISNKVMLMIKCLLPTIVAMLIVSAIVILKNKRDDDDNSTKRDLIALDTPIRISYFELLRGTNGFDESNLIGSGSFGSVYKAILPNEKIVAVKVFNLDIEEASRSFDVECSAMCHLRHRNLIKIISSCSNGHFKSLIMEFMVNESLDKWLYSHNYYLNVLQRLNIMIDVATALEYLHHGSSTPVVHCDVKPSNVLLDEDMMAHLGDFGIAKLFGEKQLEIYTKTLATIGYIAPEFGSKGVVSIKGDVYSFGILLMEIFTRKKPTDEMFVQGLSLKDWVGNSTPHSIMYIIDVNLLQRENQNTDNILPYMSSVFELALHCSTELPEARLTMIDVVASLRKIKSLFMENASHATS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0271 431 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Acco03g0271 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Acco03g0271 431 Gene3D Transferase(Phosphotransferase) domain 1 219 429 - -
Acco03g0271 431 ProSiteProfiles Protein kinase domain profile. 143 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0271 431 SMART serkin_6 143 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0271 431 FunFam Serine-threonine protein kinase plant-type 124 218 - -
Acco03g0271 431 Pfam Protein kinase domain 144 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0271 431 Pfam Leucine Rich Repeat 5 25 IPR001611 GO:0005515
Acco03g0271 431 Gene3D Phosphorylase Kinase; domain 1 104 218 - -
Acco03g0271 431 SUPERFAMILY L domain-like 2 60 - -
Acco03g0271 431 PANTHER OS04G0122200 PROTEIN 6 419 - -
Acco03g0271 431 SUPERFAMILY Protein kinase-like (PK-like) 121 415 IPR011009 -
Acco03g0271 431 Gene3D Ribonuclease Inhibitor 1 81 IPR032675 -
Acco03g0271 431 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 219 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0271 Acco-ChrAcco03 3413321 3414828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0271 1 430 Receptor kinase-like Gene Family AT3G47570 40.564 3.94e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0271 Pkinase 1.2e-43 CL0016