Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0259 ATGAGTCAGACTCACAGCCATAGCCACAGCCACGACGACACCACCACCACCACAGCCACTACCATGGCCGCCGCCGCGAAGCTCGACGACGGTCACGAGCTTGACATGGTGATGCCGGGCTTCCGATTTCACCCCACGGAAGAAGAACTCGTGGAATTCTACCTTCGCCGTAAGGTTGAGGGAAAACGTTTCAATGTTGAGCTCATCACTTTCCTTGATCTTTACAGCTATGACCCCTGGGAGCTTCCTGCGATGGCGGCGATTGGAGAGAAGGAGTGGTACTTCTATGTGCCGAGAGATCGGAAGTATCGGAACGGCGATCGTCCCAACCGAGTAACGACGTCGGGGTACTGGAAAGCCACCGGAGCAGATAGAATGATTAGGACTGAGAATTTCAGGTCGATTGGGCTCAAGAAAACCCTAGTTTTCTACACTGGTAAAGCTCCTAAAGGTATCAGAACCAGTTGGATCATGAACGAATATCGCTTGCCTCACCACGACACCGAACGATACCAAAAGGCTGAGATATCGCTGTGTAGAGTGTACAAGAGACCAGGAGTAGAAGACCATCCTTCACTTCCTCGTTCTCTTGCAACGAGGCCATCTTCTTCTTCAAGAGCTTCTTCACACTCTTCAGTAAAAAGCATCACTAAGCGCAACACCGAAACGTTTCATCATCAGAGCAGCAACAACAACAACAACAACGTAGAATTTGGGGCACAAAGTACGATGATGACGATGATGATGAACAACTACAATCATCATCATCATCGAACGGATCATGAGCAGTTATTAGGAAAAAGCTCTTCAGATAACAATCAAGGGGTCTCTATAGCTCTTGGGCTTTCAAAACAAAGCCATAATATCATTAACCCTAATAATTCTTCAACTTCAACATTAATGGCGGATCCTCCATTTCCACTCATTGAGGATGAAGATTTACTGATGCTCACTAATATGGCAACACAGCCATTGTTGATGAAGCAAGCTCAACCTTCTTCTTCTTCCTCCTTCTTCTTCCCACCACCTAGCTCTGGTACTAATTGTAATAATAATAATTCTTCTTCACCTTCTTCATCAAAAGTGGAAGATCTCAATAGGCTCTTGAGTTATAATCAGCTGCAACAATACTTCAGCACCAACAATGCTCCAACCCATCATCACCATTACCAACAACAGTTGTCAAATAATTTTCTGGTGCAACCTCAAATACCAACGGCTCTGATGATCAGTTCTTCCTCGTTGTCCCTGCCAACTTCGCTTCCATTAACGACCACACCGATCACGACGGCAACCATCACGACCAACTTGATCTCTGATAATAAACTGTGGGAATGGAATAATCTCATCCCTGAGCCTAGTAACAGAGAGTACAGCAACATGTCCTTCAAGTAA 1395 0.4566 MSQTHSHSHSHDDTTTTTATTMAAAAKLDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYSYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDHPSLPRSLATRPSSSSRASSHSSVKSITKRNTETFHHQSSNNNNNNVEFGAQSTMMTMMMNNYNHHHHRTDHEQLLGKSSSDNNQGVSIALGLSKQSHNIINPNNSSTSTLMADPPFPLIEDEDLLMLTNMATQPLLMKQAQPSSSSSFFFPPPSSGTNCNNNNSSSPSSSKVEDLNRLLSYNQLQQYFSTNNAPTHHHHYQQQLSNNFLVQPQIPTALMISSSSLSLPTSLPLTTTPITTATITTNLISDNKLWEWNNLIPEPSNREYSNMSFK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0259 464 MobiDBLite consensus disorder prediction 196 217 - -
Acco03g0259 464 SUPERFAMILY NAC domain 37 184 IPR036093 GO:0003677|GO:0006355
Acco03g0259 464 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 36 272 - -
Acco03g0259 464 MobiDBLite consensus disorder prediction 332 362 - -
Acco03g0259 464 Pfam No apical meristem (NAM) protein 39 163 IPR003441 GO:0003677|GO:0006355
Acco03g0259 464 Gene3D NAC domain 46 187 IPR036093 GO:0003677|GO:0006355
Acco03g0259 464 MobiDBLite consensus disorder prediction 187 217 - -
Acco03g0259 464 FunFam NAC domain-containing protein 35 46 187 - -
Acco03g0259 464 ProSiteProfiles NAC domain profile. 37 184 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0259 Acco-ChrAcco03 3229968 3232546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0259 35 196 NAC Transcription Factor Family AT5G39820 50.802 1.13e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco03g0259 NAM 1.6e-34 No_clan