Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0257 ATGAGAAGAAGAATACAATGTAGGAAGAGGGATTTGTCAAACAACAAGGGCTTGACAGGATCCCTTCCTCAAACGATTGGAAATTTGAAGAATCTGTCAACCTTAATGCTTGTTGGTTGTAGTTTCAATGGTCCTATCCCAGAAGAAATAGGAAATCTGCAGGAGCTCCTCTTCCTATCCTTAAATTCCAATAAGTTTGTTGGACAAATTCCAGCTTCTATTGGTAATCTATCTAAACTTCGTTGGTTAGATGTATCTGATAATCGGCTTGGAGGACCCATCCCAGTATCTAGTGGCAGTAAGCCTGGTCTTGATATGCTCTATCAGGCAAAGCATTTTCATTGTGGCAACAATAAGCTCTCAGGCCCCATTCCTCCTAAACTTTTTAGTTCGAAAATGACTTTGATTCATGTGCTTTTTGAAAGTAATCAACTCAGTGGAAGCATCCCATCTACACTTGGACTTGTTAAGAGTCTGGAGCTGGTGCGTCTGGACAGTAATGGTCTAAGCGGGCCGGTGCCTTCAAACATCAGCAACCTTGTGAATGTTCAACAGATAGGTTTCACATTTACATTTGTCAGGTACTTGTCCAACAATAAGCTTTCAGGATCCTTGCCAAACCTTGCAGGAATGAGCGTCCTCAGCTACATGGATATCAGCAATAATAGCTTCGATTCGTGGGATTTTCCATCATGGTTATCAACCATGCAGTCCCTAACAACGTTAAAGATGGAGAACACACAACTTCAAGGACAGATCTCTTCTTCTTTCTTTGACCTTCCCAATTTACAGACCGTGGTTTTAAAACGTAATGAACTAGATAGAACCTTGGACATTGACTCATCCCACAGCAGCCAGCTGCAACTCATTGACTTGCAGAGTAATAAAATTGACCTGCTTAGCTCAAATGGAGTCCCCAAGGTCAAGATAATACTCAAAGGTAACCCAATTTGTGAAGAAAATGGAACGGCATCAGAGAATTACTGTTCCAATTCCCAACCCAGTGATGACCTATGTAAAACACCATTTAAGAACTGTGAGCCTGGTGCCTGTACTGTAGAACAGCTTCCTAGCCCCAACTGCCAATGCTCTTATCCATATACAGGAACTTTATCTTTCAGAGCAATTTCCTTCTCAGACTTGGGAAACAAAACTCACTATGCAACTCTTGAGGAGTCTCTTATACATTCTTTTCAACTTCATTATCTTCCTGTGAATTCAGTTTCTCTGAGCCAACCAATCAAGGATTCAAGACAGTATCTTGTATTGAGCTTACAAGTCTTCCCATCAAGTCAAGATCGTTTCAATCGAACTGGGACTTCTAGCATTGATTTTATGCTAAATCATCAGATATATACGCCTCCTAAAGGGTTTGGACCAATTTTCTTTCTTGCAGACAGTTATGGACACTTTGGATCTGCGAAGATTAGTAAATCATCAAACATTAGCATCATAATAGGAGCAACAGTTGGTGGTTCAATCCTGCTAGTGTTGTTACTCCTCGCTGGTTTTTATGCTTGCTTCCAAAAGAAGAGGGCAGAAAGAGCAATTGACCACAACTATCCTTTCAAACGCTGGGGTAGTGAGAGTGGTGCCCCTCAGTTGAAAGGAGCAAAGCAGTTCTCATTTGAAGAAATTAAAAAGTGCACTACAAATTTTTCTCAAGCTAACGAGATTGGAACTGGTGGTTACGGGAAGGTTTATAAGGGAACTCTTCCAAATGGACAACTGATAGCCATAAAACGAGCTCTAAAAGAATCTATGCAAGGAGCATTTGAATTTAAAGCAGAGATTGAACTTCTATCTAGAGTCCACCATAAAAATCTTGTTAGTCTTTTAGGATTCTGCTTTGATAAGGGAGAACAAATGCTTGTTTATGAGTATGTACCAAATGGGAGTCTGAAGAATACTCTCTCAGGGAGATCAGGATTTAAATTGGATTGGATCAGAAGGCTAAAAATAGCCCTCGGCACTGCCAGGGGTTTGACTTATCTTCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCAAACAATATTTTACTGGATGAGCGCTTGAATGCAAAGGTTGCTGATTTTGGTCTCTCCAAGTCTATGATTGATACTGCAAAAGACCATATAACCACTCAAGTTAAAGGAACAATGGGCTATTTGGATCCAGAGTATTATATGTCTCAACAATTAACAGAGAAGAGTGATGTTTACAGCTTCGGAGTGGTATTGCTGGAGCTGATAACTGCAAGAAAACCTATAGAAAGAGGGAAATATATAGTAACAGAGATCAAGAGTGCAGTTGATAAGAAGAAAGATTTGTGTGGTCTTTATGAATTCCTGGACCCCACCATGGATTTAGGGTCAACACTGATTGGTCTTGCGCAGTATGTGAGTCTTGCAATGAAGTGTGTGGGGGAGTCAGGTTCTGACAGGCCTCCAATGAGTGATGTGGTGAAAGAGATTGAAAACTTGTTGCTGTTGGCTGGTGCTAACCCTAATGCTGAATCAGCATCCACGTCAGCTAGTTATGAGGATATTAGTAAAGGAAGTTCTCGTCATCCTTACAGCAATGAGTCCCTTGATGCAGGTGCAGTGCTTCCAAATCCAAAGATTGAGCCTATGTAA 2628 0.4091 MRRRIQCRKRDLSNNKGLTGSLPQTIGNLKNLSTLMLVGCSFNGPIPEEIGNLQELLFLSLNSNKFVGQIPASIGNLSKLRWLDVSDNRLGGPIPVSSGSKPGLDMLYQAKHFHCGNNKLSGPIPPKLFSSKMTLIHVLFESNQLSGSIPSTLGLVKSLELVRLDSNGLSGPVPSNISNLVNVQQIGFTFTFVRYLSNNKLSGSLPNLAGMSVLSYMDISNNSFDSWDFPSWLSTMQSLTTLKMENTQLQGQISSSFFDLPNLQTVVLKRNELDRTLDIDSSHSSQLQLIDLQSNKIDLLSSNGVPKVKIILKGNPICEENGTASENYCSNSQPSDDLCKTPFKNCEPGACTVEQLPSPNCQCSYPYTGTLSFRAISFSDLGNKTHYATLEESLIHSFQLHYLPVNSVSLSQPIKDSRQYLVLSLQVFPSSQDRFNRTGTSSIDFMLNHQIYTPPKGFGPIFFLADSYGHFGSAKISKSSNISIIIGATVGGSILLVLLLLAGFYACFQKKRAERAIDHNYPFKRWGSESGAPQLKGAKQFSFEEIKKCTTNFSQANEIGTGGYGKVYKGTLPNGQLIAIKRALKESMQGAFEFKAEIELLSRVHHKNLVSLLGFCFDKGEQMLVYEYVPNGSLKNTLSGRSGFKLDWIRRLKIALGTARGLTYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMIDTAKDHITTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVVLLELITARKPIERGKYIVTEIKSAVDKKKDLCGLYEFLDPTMDLGSTLIGLAQYVSLAMKCVGESGSDRPPMSDVVKEIENLLLLAGANPNAESASTSASYEDISKGSSRHPYSNESLDAGAVLPNPKIEPM 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0257 875 CDD STKc_IRAK 559 825 - -
Acco03g0257 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Acco03g0257 875 Gene3D Ribonuclease Inhibitor 102 321 IPR032675 -
Acco03g0257 875 ProSiteProfiles Protein kinase domain profile. 553 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0257 875 FunFam Leucine-rich repeat protein kinase family protein 520 628 - -
Acco03g0257 875 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 5 94 - -
Acco03g0257 875 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 629 838 - -
Acco03g0257 875 Gene3D Phosphorylase Kinase; domain 1 527 628 - -
Acco03g0257 875 Coils Coil 875 875 - -
Acco03g0257 875 FunFam Leucine-rich repeat protein kinase family protein 100 207 - -
Acco03g0257 875 PANTHER RECEPTOR-LIKE PROTEIN 55 12 824 - -
Acco03g0257 875 Gene3D Ribonuclease Inhibitor 6 101 IPR032675 -
Acco03g0257 875 MobiDBLite consensus disorder prediction 835 858 - -
Acco03g0257 875 Pfam Protein kinase domain 554 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0257 875 SMART serkin_6 553 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0257 875 ProSitePatterns Protein kinases ATP-binding region signature. 559 585 IPR017441 GO:0005524
Acco03g0257 875 MobiDBLite consensus disorder prediction 835 875 - -
Acco03g0257 875 SUPERFAMILY L domain-like 10 302 - -
Acco03g0257 875 SUPERFAMILY Protein kinase-like (PK-like) 539 835 IPR011009 -
Acco03g0257 875 Gene3D Transferase(Phosphotransferase) domain 1 629 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0257 Acco-ChrAcco03 3186211 3193451 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0257 6 874 Receptor kinase-like Gene Family AT5G49760 55.479 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco03g0257 Pkinase 7.6e-47 CL0016