Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0254 ATGGGTGAAAGAGTATTAGTGTTACTGGTTCTTGTTTTCACGTTTTTTCTGGTTGCAGAAGCAGAAACAGCTCATGAGGATTTTATAGCTCTAAGGTCTCTTATGGATACATTGAAGAACACTTCTGCTAGTTGGTCAGGTTTAGATCCTTGTGGTGATAGTTGGGGTGGAATCAAGTGCACCGACTCTCGTGTTACTTCGATAAAATTATCAAGCACAGGTTTGACAGGCCAGCTATCAGGAGATATTGGTTTGCTTTCAGAATTAGAAACATTGGATCTCTCTTACAACAAGGCCTTAACTGGTTCACTTCCACCAGAAATCGGAAACTTGAAGAAATTGTCCAGCTTGTTTCTTGTTGATTGTAGTTTCACTGGTCCTATTCCAGATGATATAGGATCCCTGGAGCAGCTTGTCTTCTTATCTTTGAACAAAAACAGTTTTTCTGGGAAAATTCCTCCTTCAGTTGGTAATCTGTCAAAACTTACTTGGCTAGATTTAACTGAAAATGATCTTGAAGGAGCAATCCCAGTATCAAGTGGAAGTATGCCTGGTCTTGATAAGCTACTCAATGCAAAACACTTTCATCTTGGAAAGAACAAGCTTTCAGGAAATATCCCCCCTCAGCTTTTTAGCTCAGAAATGACTCTGATACATGTGATTTTGGATAACAATCTGCTTACAGGCAACATTCCTTCAACACTTGGACTTGTTCAGAGTCTGGAGGCGGTGCGATTTGACAAAAATTACTTAAATGGACACGTGCCTCAAAACATCAACATTCTTGAGAATCTTCAGGAGTATTTGTCCAACAATAACCTGTCTGGTCCTATGCCCAGCCTGAGGGGAATGAATTTACTCACATACCTTGATATGAGCAACAATAACTTCGATCCTTCAGATTTTCCACCATGGCTTCCTACTCTATGGAATTTAACAACATTAAAGATGGAGAACATTCAACTTACAGGGGAGATTCCTGCTACTCTCTTCAGTCTTGTTCATTTACAGAATGTGGTGCTGAATCTTAATAATCTCAATGGCTCCTTGAACATTGGCACCAACTACAGCAAGCAATTGAAACGAATTGAGTTGCAGGATAACAAAATTGACAGATTTGAGCAACAAGATCTTGCCTCCAACATTAAGATAATACTGGTGAACAATCCTATTTGCCATGAAGAGGGAAAAACACAAAGTTACTGTTCTGATGTGACAGCCAATGTAACATATACAGCAACAACAAGTTCCTGCCCTCCTTCTACTTGCAGATCATATCAGGATCTCAGTCCAACCTGCAAATGTGCTTATCCATTAATGGGAATTTTAAGTTTCAGAACACCTTCCTTCCCAGACTGGCAAAACTATTCTCATTTTGAGGAAAATCTACTGGATTATTTTAAAGCTAATTTTCTCCCTGTGGGTTCAGTTTCTCTGAAAAATCTGACCTTGAATCAACTTCAAGATGTTGAATTGAGCATACGAGTGTTCCCTTCAAGGGAAGATCATTTCACCAGAATTGAGATTTCTAGTATAACTTCTCTTCTGAGCAACTTGACTGATTATCCATTCTATTTCTATCCATACCCTTATGAACATTATGAACCTACGGAATCAAGTGAAAAATCAAATGTTGCTTTTAAAACTGGAGCAATTATTGGTTGTTCTGTTGTGCTGGTCTTGCTACTTTTTGCTGGCATTTACGCTTTCTACCAAAAGAAGAGGGCAGAAAAAGCAATTGCTCAAAGCAATCCTTTTGGACAAAGGGTTTCCAAGGACAGCAAAATCATGATCCCTCAATTGAAAGGAGTAAGGCAATTCTCTTTTGCAGAAGTTAAGAAATGCACCAGAAATTTCTCTCAAGACAATGATATCGGATCTGGGGGTTATGGAAAGGTTTATAAAGGGACACTTCCCAATGGGCAACTAGTGGCCATAAAAAGAGCTAGAAAAGATTCAAAGCAGGGAGGGCTTGAGTTTAAAGCTGAGATTGAACTTCTGTCAAGGGTTCACCATAATAATCTTGTAAGCCTTATAGGGTTCTGCTTTGAGCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCTAATGGAACTTTATATGATACCATCTCAGGGAAATCAGGACTTAGATTGGATTGGCCTAGAAGGCTAAAGGTAATCCTTGGTGCCGCTAAAGGTTTAGCTTATCTTCATGATCATGCCAATCCTTGTATCATACATAGGGACATCAAGTCAAGTAACATATTGCTGGATCATCACTTGAATGCCAAAGTAGCTGATTTTGGGCTTTCCAAGACTATGGTTGATTGTGACAAAGATTATATCACTACTCAAGTTAAAGGAACTATGGGCTATTTAGATCCAGAGTATTACACGACTCAACGTTTGACTGAAAAGAGCGATGTTTACAGCTTTGGAGTTCTGATGCTGGAGATGATAACTGCTAGAAAACCTATAGAGAAAGGTAAATACATAGTGAAAGTGGTTAGGGATTCAATTGGTAGAGAAAAGGAGTTATATGGACTTGAAGAAATTGTTGACCCAGTGATGGGTTCAGAGTCATCAACACTGAAGGGTTTAGAGAACTATGTGGATCTCTCAATGAAGTGTCTTCAGGAGACAGGTGGTGATAGGCCTTCAATGAATGATGTGGCAAAAGAAATTGAAAGCATTTTGCTGATAGCTGGTTTGAACAACACTTCTGGTTCAATAGCATCTACTTCATCTACTTTTGATGTGATAACAAGAGGGAGTCCTCCGAATCTTTCCAGTAATGAATCCTTTGATTCAGGTGTGGTACCCCTGCATCCAAAAATTGAGCCTAAGCAAGTCATATGTACAATTTAG 2850 0.3919 MGERVLVLLVLVFTFFLVAEAETAHEDFIALRSLMDTLKNTSASWSGLDPCGDSWGGIKCTDSRVTSIKLSSTGLTGQLSGDIGLLSELETLDLSYNKALTGSLPPEIGNLKKLSSLFLVDCSFTGPIPDDIGSLEQLVFLSLNKNSFSGKIPPSVGNLSKLTWLDLTENDLEGAIPVSSGSMPGLDKLLNAKHFHLGKNKLSGNIPPQLFSSEMTLIHVILDNNLLTGNIPSTLGLVQSLEAVRFDKNYLNGHVPQNINILENLQEYLSNNNLSGPMPSLRGMNLLTYLDMSNNNFDPSDFPPWLPTLWNLTTLKMENIQLTGEIPATLFSLVHLQNVVLNLNNLNGSLNIGTNYSKQLKRIELQDNKIDRFEQQDLASNIKIILVNNPICHEEGKTQSYCSDVTANVTYTATTSSCPPSTCRSYQDLSPTCKCAYPLMGILSFRTPSFPDWQNYSHFEENLLDYFKANFLPVGSVSLKNLTLNQLQDVELSIRVFPSREDHFTRIEISSITSLLSNLTDYPFYFYPYPYEHYEPTESSEKSNVAFKTGAIIGCSVVLVLLLFAGIYAFYQKKRAEKAIAQSNPFGQRVSKDSKIMIPQLKGVRQFSFAEVKKCTRNFSQDNDIGSGGYGKVYKGTLPNGQLVAIKRARKDSKQGGLEFKAEIELLSRVHHNNLVSLIGFCFERGEQMLVYEYVPNGTLYDTISGKSGLRLDWPRRLKVILGAAKGLAYLHDHANPCIIHRDIKSSNILLDHHLNAKVADFGLSKTMVDCDKDYITTQVKGTMGYLDPEYYTTQRLTEKSDVYSFGVLMLEMITARKPIEKGKYIVKVVRDSIGREKELYGLEEIVDPVMGSESSTLKGLENYVDLSMKCLQETGGDRPSMNDVAKEIESILLIAGLNNTSGSIASTSSTFDVITRGSPPNLSSNESFDSGVVPLHPKIEPKQVICTI 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0254 949 CDD STKc_IRAK 625 892 - -
Acco03g0254 949 FunFam Leucine-rich repeat family protein 26 181 - -
Acco03g0254 949 Gene3D Transferase(Phosphotransferase) domain 1 695 901 - -
Acco03g0254 949 FunFam Leucine-rich repeat protein kinase family protein 585 694 - -
Acco03g0254 949 SMART serkin_6 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0254 949 SUPERFAMILY L domain-like 30 297 - -
Acco03g0254 949 SUPERFAMILY L domain-like 238 418 - -
Acco03g0254 949 FunFam Leucine-rich repeat protein kinase family protein 182 280 - -
Acco03g0254 949 SUPERFAMILY Protein kinase-like (PK-like) 604 896 IPR011009 -
Acco03g0254 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 695 904 - -
Acco03g0254 949 Gene3D Phosphorylase Kinase; domain 1 589 694 - -
Acco03g0254 949 ProSiteProfiles Protein kinase domain profile. 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0254 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Acco03g0254 949 ProSitePatterns Protein kinases ATP-binding region signature. 625 651 IPR017441 GO:0005524
Acco03g0254 949 Gene3D Ribonuclease Inhibitor 182 390 IPR032675 -
Acco03g0254 949 PANTHER RECEPTOR-LIKE PROTEIN 55 32 892 - -
Acco03g0254 949 Pfam Protein kinase domain 620 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0254 949 Coils Coil 356 376 - -
Acco03g0254 949 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0254 Acco-ChrAcco03 3157348 3170875 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0254 1 943 Receptor kinase-like Gene Family AT5G49760 50.782 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco03g0254 Pkinase 3.2e-47 CL0016