Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0247 ATGTTTCCGAGACTGATACACCCTCATGAAAGCTTAATCGAAGATTTTGAGGGTGCTTCGAACCTCAACAATCACAAGGGTGACCCATGTCTGGTTTTGACCGCCGATCCCAAACCTCGCCTCCGATGGACCCAGGACCTCCACGAACGATTCGTCGATGCTGTCACCCAACTTGGTGGTGCTAATAAAGCTACACCAAAAGCAATCATGCGTACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGCCATCTTCAGAAATACAGACTTGGTAAACAATCAGGGAAAGATATGGTTGAAGGATGCAAAGATGGGATGTCAGGCTCTTATCTTCTAGAAAACCCCAGTACTGATAATAACTCTCCAAAGTTGCCAGCTTCTGATACAAACGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAAAGTAAGCTTCATTTGCAAGTAGAGGCAGAGAAGCATTTGCAGATTCGCCAAGACGCAGAGCAGCGGTACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTTGCTGATCAATTTATCAGTGCGACGGTTATTGAGCCGGACAACCAAAAAGTTCAAGATCTTGGAACTAAAGCACCAAGAGGTTCCCTGCTTGATTCTCTAGGATTCTACTCCTTGCCATCTACTGAGGTAGCCGGAGTTTGTGTCCCGGATGAGAAAATCATGCCTAGTTTTGAGCGGCCTAGGACTGGCTGTTCTACTGAAAGTTGCCTAACATCTCACGGGAGTTCTAATGGGCTGGCTTCTGAAGGATATCCAGATGGAGGTAAAAAGAGGATGTTGGGCTTGAACCCTATGGCCCCACCTTTGATCTGGGGTGAAGCCAAAATGAGAGCTCAAGACATTAATGTAGCCCAAGGTAATCTTCATGGAATAGCCAGGTATGGCATGTAG 936 0.4605 MFPRLIHPHESLIEDFEGASNLNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMVEGCKDGMSGSYLLENPSTDNNSPKLPASDTNEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFISATVIEPDNQKVQDLGTKAPRGSLLDSLGFYSLPSTEVAGVCVPDEKIMPSFERPRTGCSTESCLTSHGSSNGLASEGYPDGGKKRMLGLNPMAPPLIWGEAKMRAQDINVAQGNLHGIARYGM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0247 311 FunFam Myb family transcription factor 37 95 - -
Acco03g0247 311 Gene3D - 37 95 - -
Acco03g0247 311 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Acco03g0247 311 MobiDBLite consensus disorder prediction 111 131 - -
Acco03g0247 311 MobiDBLite consensus disorder prediction 112 129 - -
Acco03g0247 311 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Acco03g0247 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Acco03g0247 311 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Acco03g0247 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Acco03g0247 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 21 260 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0247 Acco-ChrAcco03 3077814 3082846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0247 15 278 G2-like Transcription Factor Family AT3G24120 44.203 3.10e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g0247 Myb_DNA-binding 2.7e-06 CL0123