Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0246 ATGGATCCTCTCAGTGGAGGTAACAATCCTGCCAACAACTCTAATCTCAGCTCAAAGCAACGTTTACGCTGGACTCATGAGCTGCATGAACGTTTTGTTGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTGCAAGGCCTAACGATATATCATGTCAAAAGCCATTTACAGAAATATCGACTTGCAAAATACCTCCCTGATTCCTTGTCTGATGGGAAAAAAGCCGAAAAGAAAGAAACTGGGGACATGCTTTCCAATCTAGACGGATCTTCTGGTGGGATACAAATTACCGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTTCAGAGACAACTTCAACTACGGATAGAAGCCCAGGGTAAATACCTGAAGAAGATAATTGAAGAGCAGCAGCGGCTTAATGGGGTTCTGTCAGAATCACCTGGCTCAGGTGTTGATGCTCCGGCATTGGCTGATGGATGTCAAGAATCAGAAAACAAAACTGACCCCGCTACCCCGGCTCCAACCTCTGAGGGCCCCCTCCAAGATAAAGCAACAAAAGAACGTGCCCCAGCAAAGAGTCTGTCTATCGATGAATCGTTTTCATCTCACCACGAACCATTGACTCCAGATTCTGGTTGCAATGGTGGCTCACCTATTGACAGTCCCAGAGGGGAGAGACCGATGAAGAAACACCGGGTGAGCATTGAGGGAGCATATTCTAAATCAGACATGATGCTTCCACTTCAGATACTAGAATCAAGCATGCCATCATACCAGCAGGCAAACAATGTTTTCCTCACCGGAGAGCAGTTTGATCCTTCATTGGGTATGTCCGCTAGGAGTGATGAGGCATTACAGAAGGTTGGTGGCAACAATCTGTGA 924 0.4729 MDPLSGGNNPANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSLSDGKKAEKKETGDMLSNLDGSSGGIQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLNGVLSESPGSGVDAPALADGCQESENKTDPATPAPTSEGPLQDKATKERAPAKSLSIDESFSSHHEPLTPDSGCNGGSPIDSPRGERPMKKHRVSIEGAYSKSDMMLPLQILESSMPSYQQANNVFLTGEQFDPSLGMSARSDEALQKVGGNNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0246 307 FunFam Myb family transcription factor 18 76 - -
Acco03g0246 307 Coils Coil 109 129 - -
Acco03g0246 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Acco03g0246 307 MobiDBLite consensus disorder prediction 156 245 - -
Acco03g0246 307 Gene3D - 18 77 - -
Acco03g0246 307 Pfam MYB-CC type transfactor, LHEQLE motif 106 152 IPR025756 -
Acco03g0246 307 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Acco03g0246 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
Acco03g0246 307 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Acco03g0246 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 298 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0246 Acco-ChrAcco03 3063827 3066472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0246 54 307 G2-like Transcription Factor Family AT2G01060 64.453 8.23e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g0246 Myb_DNA-binding 1.9e-08 CL0123