Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0232 ATGTCTCTCAGAAAACCTCCACTTCCACGTCTCCTCCTCAATGATGTTTCCTGCATGAGAAATGCCCAACAAATTCTTCATCACGTGAATGTATCCCTTCATGATGGCAGTGCACTCATGTTAACCGGTGCAAATGGCTCTGGTAAGACAACTTTCTTGCGCATGTTAGCTGGATTTTCACGCCCTTCAGCTGGAGAAATCCTTTGGAATGGCCATGACATTACACAATCTGGAATATTTCATCAGTATAAGCTTCAGCTCAATTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAATTTACAACTGTCAATGGGCCAGCGGAAAGATTGCAACTTGCCAGATTGTTGGCGATCGATCGTCCAATTTGGTTGCTTGATGAGCCGTCAGTTGCATTAGATAATGAAGGGGTGAAGTTACTTGAGTACATAATTGCAGAACATAGAAAGAATGGAGGGATTGTGATTGTGGCAACTCATTTACCAATTAAGATTAAAGATGGCATGGTCTTAAGGCTGCCTCCAAGATTTCCTAGGAGGTTGACTTTAGTGGATATGCTTGATCGTGCTGATATTTAG 576 0.4253 MSLRKPPLPRLLLNDVSCMRNAQQILHHVNVSLHDGSALMLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTTVNGPAERLQLARLLAIDRPIWLLDEPSVALDNEGVKLLEYIIAEHRKNGGIVIVATHLPIKIKDGMVLRLPPRFPRRLTLVDMLDRADI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0232 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 159 IPR027417 -
Acco03g0232 191 Gene3D - 4 106 IPR027417 -
Acco03g0232 191 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 103 IPR005895 GO:0017004|GO:0022857
Acco03g0232 191 Pfam ABC transporter 26 91 IPR003439 GO:0005524
Acco03g0232 191 Gene3D - 107 166 IPR027417 -
Acco03g0232 191 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 191 IPR003439 GO:0005524
Acco03g0232 191 CDD ABC_ATPase 13 161 - -
Acco03g0232 191 SMART AAA_5 35 186 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0232 Acco-ChrAcco03 2905941 2906626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0232 24 141 Calmodulin-binding Proteins AT2G36910 23.977 3.33e-06 45.1