Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0223 ATGAGGAGAAACGGCAACTTAGAACTTCGTCTTTTCCCTTCTCACGATTCCAGCCCCAATCACCACCACCCCATGGTGGGAGAAGGCAGTAATAATAATGGCGAGAGAGAGATGAGTGCTGCAGAGGATGAAGGGCAGCAACAGAAGCTCACAATTTTCTATGATGGCAAGGTTTGCGTCTCTGATGTCACCCACCTTCAGGCGAGTTGGATAATGAGGGAAGCAAGCAAAGAAATGGCGGAGGAGAAGAACATGATTAAGTTGAACAAATCATTGAGTGAATCTCAGAGGCAGATGTGTAGCCCTAACAACAACAATGCTTCATCACTTTCCATGAAGAGATCTCTCCAATGTTTCCTCCAGAAGCGCAAGGATCGTATCCTCCATTCTCCTCATCCTTACCATCATCCTTAA 414 0.4614 MRRNGNLELRLFPSHDSSPNHHHPMVGEGSNNNGEREMSAAEDEGQQQKLTIFYDGKVCVSDVTHLQASWIMREASKEMAEEKNMIKLNKSLSESQRQMCSPNNNNASSLSMKRSLQCFLQKRKDRILHSPHPYHHP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0223 137 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Acco03g0223 137 MobiDBLite consensus disorder prediction 1 45 - -
Acco03g0223 137 SMART tify_2 43 77 IPR010399 -
Acco03g0223 137 Pfam Jas motif 113 134 IPR018467 -
Acco03g0223 137 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 135 IPR040390 -
Acco03g0223 137 Pfam tify domain 45 75 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0223 Acco-ChrAcco03 2785712 2787571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0223 1 135 Tify Gene Family AT1G30135 41.429 3.74e-20 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco03g0223 tify 1.4e-11 No_clan