Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0220 ATGAAGATGATGAGAAACTGCAACTTAGAACTTTGTCTTTTCCCTTCTCACGATTCCAGCTACAATCACCACCACCACCCCATAATGGGAGAAGGCAATAATGATGATGATGATGATGAGAGAGAGATCAGAGGAGAGGATGAAGGGCAGCAACAGAAGCTCACAATTTTCTATGATGGCAAGGTTTGCATCTCTGAAGTCACCCACCTTCAGGCGAGGTGGATAATGAGGGAAGCAAGCAAAGAAATGGCAGAGGAAGAGAAGATAATGATGAAGAGATCACTGAATCAGAGTCATGAGAGGGAGATTTATAGCCCTAATAATAAAAACAACAACAACAACACTACGACTTCGCTTTCCATGAAGAGATCTCTCCAACACTTCTTTCAGAAGCGCAAGGCTCGTATCCTCCATTCCTCCCCTTACTATCATCCTTAA 438 0.4315 MKMMRNCNLELCLFPSHDSSYNHHHHPIMGEGNNDDDDDEREIRGEDEGQQQKLTIFYDGKVCISEVTHLQARWIMREASKEMAEEEKIMMKRSLNQSHEREIYSPNNKNNNNNTTTSLSMKRSLQHFFQKRKARILHSSPYYHP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0220 145 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 33 143 IPR040390 -
Acco03g0220 145 SMART tify_2 47 81 IPR010399 -
Acco03g0220 145 MobiDBLite consensus disorder prediction 24 51 - -
Acco03g0220 145 MobiDBLite consensus disorder prediction 100 117 - -
Acco03g0220 145 ProSiteProfiles Tify domain profile. 47 81 IPR010399 -
Acco03g0220 145 Pfam Jas motif 122 143 IPR018467 -
Acco03g0220 145 Pfam tify domain 50 79 IPR010399 -
Acco03g0220 145 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0220 Acco-ChrAcco03 2726880 2728646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0220 1 143 Tify Gene Family AT1G30135 38.961 3.95e-21 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco03g0220 tify 1.6e-10 No_clan