Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0213 ATGGAGGAGGATGGGATTCAAGGACAAGCGTGTAAATTCCCAAGAATTGAAAATGGAACTGCAAGAAACGATTCCTCCAACAACACCAAGATAGGTTCCAGTATTAAGGAAGAAAATGGAGTCCTCCTCAGAAAAAGAAGTGGCGGAGGAGGCGGCGGAGACGGAAGCAGCCACCGATTTCACAGCTGGAACCACCACTCATCTCGAATCATTAGGGTTTCTCGTGCCTCCGGTGGGAAAGATCGGCACAGTAAGGTCATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTCGTCTCTCTGTAACCACAGCGATTCAATTCTATGACCTTCAAGATCGTCTTGGTTATGACCAACCTAGTAAAGCTGTGGAATGGTTAATTAAAGCTGCTTCTGATGCAATTTCTGAGCTTCCTTCTCTGAACAATACCTTTCCTGACACCCCAAAACAGCCCAGTGATGAGAAGAGGGGCGGTGAGAAATGTGGAATCGGTTCAGCTGATGCAGAAAATGGTGAAGCGAGTTTCCACCCCCAGAATCAGAATCAGAGCCAGAATCTTTCCTTGTCCAAGTCTGCTTGCAGTAGCACATCGGAGACGAGCAAAGGCTCCGGCGGCTTGTCCCTCTCGAGGTCGGAGATTCGGGTCAAGGCCCGCGAGAGGGCGAGGGAGAGAGCAGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATAATAATAATATTGCTCATCATTCCCATAATAATAATAATAACATTGTCATCTCCATGGCTCAAACTTCTTCCTTCACTGAGCTTCTCACCGGTGTACCTGCGGCGACTACTAGTTCCACCGGGTCGGGTCACCACCAACACTACCACCATCGGAGTGATGAGGCTGATCTGTTCAACAAAGGAGCTAGACATCAATGGAGTATAGCGCCGATGGACTACTTCGGCGCCGGGATTCTGGGAGGTTCTTCGTCGACGTCGGGTTCAAGAACTGGCCAGCATCATCATCAATCTTCTGGGTTTTCAGGGCAGATCCAATTGGGGAACAATCTTGCTCAGGCAATGTCGGTTGCACCACCATTCGGAGTGCAAAGTGAAAACCAGCAAGCAGATCAGCTTCAGCATTTCTCGTTCATCACCGACCATCTTATGCCGGCGGGGGTGGTGACGTCGTCCTCGTCGGCGTCGCAGGCCCCAAGCGGCGGCGGTGGGGGGAGCGGCGAGTACAATCTCAACTTCACAATCTCTTCTTCTTCAAATTCCGGCGGCCTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCATCATCTGCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTACCTTTCTTCATGGGAGCCGCCGCAGCTCCAGCCATGGAGAATCACCACCACCACCACCAACACCAACACCAACACCATCAGTTCTCGCCCGAACTAGACGGCCGCTTGCAACTCTACTACGGCGACGGAAGCCGACATTCAGACCAGAAGGGGAAGGGAAAGAACTGA 1530 0.5111 MEEDGIQGQACKFPRIENGTARNDSSNNTKIGSSIKEENGVLLRKRSGGGGGGDGSSHRFHSWNHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPDTPKQPSDEKRGGEKCGIGSADAENGEASFHPQNQNQSQNLSLSKSACSSTSETSKGSGGLSLSRSEIRVKARERARERAAKEKEKENDESCNNNNIAHHSHNNNNNIVISMAQTSSFTELLTGVPAATTSSTGSGHHQHYHHRSDEADLFNKGARHQWSIAPMDYFGAGILGGSSSTSGSRTGQHHHQSSGFSGQIQLGNNLAQAMSVAPPFGVQSENQQADQLQHFSFITDHLMPAGVVTSSSSASQAPSGGGGGSGEYNLNFTISSSSNSGGLAGFNSRGTLQSNSPSLLPHHLQRFSPLDGSSNLPFFMGAAAAPAMENHHHHHQHQHQHHQFSPELDGRLQLYYGDGSRHSDQKGKGKN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0213 509 MobiDBLite consensus disorder prediction 1 69 - -
Acco03g0213 509 MobiDBLite consensus disorder prediction 321 340 - -
Acco03g0213 509 MobiDBLite consensus disorder prediction 212 238 - -
Acco03g0213 509 MobiDBLite consensus disorder prediction 172 207 - -
Acco03g0213 509 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 398 IPR005333 GO:0003700
Acco03g0213 509 MobiDBLite consensus disorder prediction 19 35 - -
Acco03g0213 509 MobiDBLite consensus disorder prediction 465 484 - -
Acco03g0213 509 Pfam TCP family transcription factor 78 231 IPR017887 -
Acco03g0213 509 ProSiteProfiles TCP domain profile. 79 137 IPR017887 -
Acco03g0213 509 ProSiteProfiles R domain profile. 211 229 IPR017888 -
Acco03g0213 509 MobiDBLite consensus disorder prediction 137 248 - -
Acco03g0213 509 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0213 Acco-ChrAcco03 2649719 2651248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0213 59 509 TCP Transcription Factor Family AT4G18390 43.249 6.35e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco03g0213 TCP 1.7e-41 No_clan