Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0200 ATGGCTGCTGAACTTGTTGGCGGTGCTGTTTTGTCTTCCTTCCTTCAGGTGGCCTTTGACAAGTTGGCTTCTCGTGAAATTCTTCACTACTTCCGAAACAGAGGATTGAATGAGGCTCTGGTGAAGAAGCTGAAGATCATTTCATTTGATGATGAGGATATTGAATCAAGGTTGAAACAAGTATATGAAATCATAGAATTTCTTGAGAATAGAAAGATTGCTCTAGGTTTAAAAGAAGGTAAAGGTGGTGCTGTTGGATTTGCCACAAAGTTGCCGACAACTTCCTTAGTCGATGAAGCTGGAACATATGGCAGGGATGAGGACAAAAAAAGTATCATTAAGTTGTTGCTAAATGACACTCACTTTTCTGTGATGTCTATAGTGGGTATGGGTGGGTTGGGTAAGACCACCCTTGCTCAGTTTGTCTATAATGATGAAAGGATCAAGAGTGAATTTGACCAAAGAGTTTGGGTATGTGTTTTTGATGATTTTAATGTTTTGGGGTTAACAAAAATCATTTTCAACAAAATCATGTCATCTAATGATGATACAGAAGATTTAGATGTGCTTCAAAATCAGTTGAAGAATAAGTTGTCTGAAAAGAAATTCCTCATTGTTCTTGATGATGTTTGGTGTGATGATTACACATCATGGGAAGCTCTTCTAGCACCTTTTATTTGTGGGGTTGCAGGAAGCAGAATTCTTGTCACTTCACGCAATGAGAGTGTTGCTTCAGCTGCCCCGTCTGATAAAACATATCGCCCGCATCATTTGTCAGATGATGATGGTTGGTTGTTATTTACAAAATATGCATTTCGCAACTCTTGTCCTCAAGCAAATTCTGATCTTGAAGAAATTGGAAGAAGGATTGTTAAAAAGTACAAAGGTTTGCCTCTGGCCTTGAAAACAATTGGAAGTCTCTTGTATAGGAAATCTTCTTTGGAGGAATGGAATAATATTTTGATGAGTGAGATGTGGAACATTTCCTGTAAAAAGATTCTTCCTACTTTGATATTGAGCTACCATTATCTCCCCTCTCATCTTAAGCGATGCTTTGCTTATTGTTCATTATTACCGAAGGATTATGAATTTGACAAGGAGACATTAGTTGAATTGTGGGTGGCTCAAGATTTCTTAAGCTGTCTAATATTTGATCAACTGTGTGAGCGCAAATGCCTGCGATTTTTATCTTTGGCTTACAATTTGGAAATTATGGAGATACCTGATTCCACAAGAAATCTCATACATTTACGGTATCTTGATCTATCTAATTGTAGAATTAAGAGAGTTCCTGATTCCATATGTCTTCTGTATAATCTACAAACATTGAAGTTGGTCAGTTGTAGGCATTTGCTTGAGTTGCCTACTGATTTGCACAAATTAAAAAAATTGTGTCTTTTGGACTTACAAAACACTCAGGTAAAAAATATTCCACCAAATTTGGGGGAGTTAAAAAATTTGAAGGTTCGTCTGACAAAATTTCATGTGGGAAAATGTAGTGATGAGTTTAACATGAAACAATTGGGGGAACTCAATCTCGACGGTGAACTTTCAATTTACGAGTTGCAGAATGCTCAGGGGATGAATGCCTTAGAGGCCAACTTGAAAGAAAAAAAGTACCTTGAGTATTTAAGCTTCCAATGGAATAAAAACAAAAATGATAATTCAGAGAAAGAAAGGGATGTGCTGGAAAAGCTCCAACCTCACCCAAACTTGGAGATACTCTCAATCATCTCCTACGGCGGTACAAGTTTTCCAGATTGGATAGCTGATAACACACTCTCCAACATAGTATCCCTCCGATTGGAAAGTTGCAAATATTGTTTTGTTTTGCCTTCATTAGGCCTTTTGCCGTCTCTCAAGTCACTAACCATTGAAGGTTTGGATAGCATTGTGGCTATTGGTGCTACACTTTCATCTAGATCTCTTGAATCCTTGGAGCTTGCAGGAATGGTGAATTGGGAGGAATGGGATTGTACGAATGTTTCAAGTGCCTTCCCAAGCCTTAAAGAGCTTCGTATAAGAAATTGTCCAAGGCTGAAGGAGAATTTGCCCCAACAACTTCCTTCTTTAGGACATCTTGTTATTAAAGACTGCCCACAACTTGTAGCATTGGTTCCGTGGGTTCCAACAATTCAGAGGTTGGCTCTTGGAAATTGTGAAAAGGTGCAGTTGGAATATGCTCCTTATTCTCTAAGAGTTCTCCGCTTTGGGGGACCATGCAGGAATGCAAATTTGCTTGAAAAGATTGAGCATTCCATTAATGACAATCGTATTGAAGAGATTGATATTTTTGATTGTCCGAATTTGAAGTTTCCATTGAGCCAACAATATGACTCACTTCATAAAATACATATAGAAAGAAGTTGTGGGTCTCTTTGGACCTTCCCATTGGATCTGTTCCCTGCACTTCAGTGGTTGGAACTTTGTGGGTGTGATAATTTGGAAATGATTTGTATTTCAGAGGGGTGCAACCATGTTCCCACAAGTCTTACAAGTTTGGTTATTAAGGAGTGTCCAAATTTCATATCATTTTCAAAAGGGGGGTTTTCTTCGTTGAGATATTGTTCTTTGGGCCGCTTGGGAAATTTGAAATCACTACCTGAGCCTATGAACACTTTTGTTCCGTCTCTTGGCAATCTACGTATAATGAATTGTCCACAACTGGAACCATTTCCAGAGGGGAGTTTGCCATCAAAACTGAAGTTTCTTACTATTGACAACGGCCCAAAACTGTTTGCTTGCCAAATGAAATGGGGTTTGCACAATCTAGGTCTTCTAAGCTCATTTAGAATCTTAGGTGATGATGCGGTGGCGTCTTTACCTGAACCAGGACTACTTCCGGCTTGTCTTACTACGCTTCGGATCGAAAGATGTAGCAATCTCAGAATGTTGGACTACAAGGCTCTTTGCCAATTGTCCTCCCTCAAACTATTGTTTCTTCAGGATTGTCCAAAACTTGAATGCTTGCCTAAGGAAGGCCTCCCCAGTTCCCTTTCTCAGCTTCATATTGGGGGAGATTGTTTGGAGCTTAAACGAAAGTGCCAGAAACTGAAAGGGGAAGATTGGGCAAAGATTGCTCACATCCCTTACGTTCGTATTTTTTAG 3108 0.3919 MAAELVGGAVLSSFLQVAFDKLASREILHYFRNRGLNEALVKKLKIISFDDEDIESRLKQVYEIIEFLENRKIALGLKEGKGGAVGFATKLPTTSLVDEAGTYGRDEDKKSIIKLLLNDTHFSVMSIVGMGGLGKTTLAQFVYNDERIKSEFDQRVWVCVFDDFNVLGLTKIIFNKIMSSNDDTEDLDVLQNQLKNKLSEKKFLIVLDDVWCDDYTSWEALLAPFICGVAGSRILVTSRNESVASAAPSDKTYRPHHLSDDDGWLLFTKYAFRNSCPQANSDLEEIGRRIVKKYKGLPLALKTIGSLLYRKSSLEEWNNILMSEMWNISCKKILPTLILSYHYLPSHLKRCFAYCSLLPKDYEFDKETLVELWVAQDFLSCLIFDQLCERKCLRFLSLAYNLEIMEIPDSTRNLIHLRYLDLSNCRIKRVPDSICLLYNLQTLKLVSCRHLLELPTDLHKLKKLCLLDLQNTQVKNIPPNLGELKNLKVRLTKFHVGKCSDEFNMKQLGELNLDGELSIYELQNAQGMNALEANLKEKKYLEYLSFQWNKNKNDNSEKERDVLEKLQPHPNLEILSIISYGGTSFPDWIADNTLSNIVSLRLESCKYCFVLPSLGLLPSLKSLTIEGLDSIVAIGATLSSRSLESLELAGMVNWEEWDCTNVSSAFPSLKELRIRNCPRLKENLPQQLPSLGHLVIKDCPQLVALVPWVPTIQRLALGNCEKVQLEYAPYSLRVLRFGGPCRNANLLEKIEHSINDNRIEEIDIFDCPNLKFPLSQQYDSLHKIHIERSCGSLWTFPLDLFPALQWLELCGCDNLEMICISEGCNHVPTSLTSLVIKECPNFISFSKGGFSSLRYCSLGRLGNLKSLPEPMNTFVPSLGNLRIMNCPQLEPFPEGSLPSKLKFLTIDNGPKLFACQMKWGLHNLGLLSSFRILGDDAVASLPEPGLLPACLTTLRIERCSNLRMLDYKALCQLSSLKLLFLQDCPKLECLPKEGLPSSLSQLHIGGDCLELKRKCQKLKGEDWAKIAHIPYVRIF 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0200 1035 PRINTS Disease resistance protein signature 294 308 - -
Acco03g0200 1035 PRINTS Disease resistance protein signature 124 139 - -
Acco03g0200 1035 PRINTS Disease resistance protein signature 412 428 - -
Acco03g0200 1035 PRINTS Disease resistance protein signature 197 211 - -
Acco03g0200 1035 SMART LRR_typ_2 461 484 IPR003591 -
Acco03g0200 1035 SMART LRR_typ_2 414 437 IPR003591 -
Acco03g0200 1035 Gene3D - 257 344 IPR042197 -
Acco03g0200 1035 PANTHER DISEASE RESISTANCE PROTEIN RP 391 702 IPR044974 GO:0006952
Acco03g0200 1035 SUPERFAMILY L domain-like 757 1027 - -
Acco03g0200 1035 SUPERFAMILY L domain-like 336 769 - -
Acco03g0200 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 355 IPR027417 -
Acco03g0200 1035 FunFam Probable disease resistance protein At1g61300 89 252 - -
Acco03g0200 1035 Gene3D - 87 252 IPR027417 -
Acco03g0200 1035 Pfam NB-ARC domain 106 321 IPR002182 GO:0043531
Acco03g0200 1035 Gene3D Ribonuclease Inhibitor 899 1022 IPR032675 -
Acco03g0200 1035 Gene3D Ribonuclease Inhibitor 734 898 IPR032675 -
Acco03g0200 1035 Gene3D Ribonuclease Inhibitor 367 733 IPR032675 -
Acco03g0200 1035 ProSiteProfiles Leucine-rich repeat profile. 416 437 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0200 Acco-ChrAcco03 2457998 2463992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0200 125 311 WRKY Transcription Factor Family AT5G45050 27.749 5.22e-10 62.0