Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0193 ATGGCTCCAGCCGGAGCCACCGCCCTCCACTCTTCCCTGTGCAGCCTCTCTCCTCACAAACCATCGCCTCCAAATTCCCAGCAGCCAACAACCCAATTGGGTCCCACCAACCCCAAAAGCCTCCTCCAAAAGCACCCACTTTATACTCCAACACACACCAAACTCTCCCTTGAATTCAAAGAAAAAATTCTCTGCCTTGAAATTATGGGTGTTGATTCAGGCAAGGCACTTTCAGTAAACCCAGATCTCAGAACAGCAACTATGGAATCCATACACTCCATTATCTTTTTCCTTCATTCCAAAGGCATTCAACAGAATGACTTACCCAAAATTCTGGGTATGTGCCCTAAAATTCTCACCTCCAGCATAAAATCTGAACTTGGACCTGTTTTTGATTTTCTCTCTCAGGACCTTAAAGTCCCAGATCGTAGCTTTAGGAGGGTCATTAACAAATGCCCAAGATTGCTCACTTCAAGTGTCAAAGACCAGCTCAAGCCAGCTTTGTTCTACCTTCAGAGGCTAGGGTTCAAGGATTTGTCAGCTTTGGCTTATCAAGATTCTGTCTTGTTGGTTTCTAATGTGGAAAGGACTCTGATTCCTAAACTGAAGTTTCTGGTGAATCTTGGGTTTTCAAAGGAAGAAACTAGAGATATGGTTTTGAGGTGCCCTACATTGTTGACATTTAGTATTGACAATAATTTTCAGCCCAAGTTTGACTTTTTTGTTGAGGTAATGGGGAGAAAGTTGGAGGAGCTTAAGGAATTTCCTCAGTATTTTGCTTTTAGCTTGGAAAACAGGATTAAGCCAAGGCATATGGAAATTGTGCAAAATGGGATTAATATGCCTTTGTCTTTGATGCTTAGGAGCACTAATGATGAGTTTAGGGAGCTCATCAAGCGGAAAACTGGTGGATGA 915 0.4273 MAPAGATALHSSLCSLSPHKPSPPNSQQPTTQLGPTNPKSLLQKHPLYTPTHTKLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIIFFLHSKGIQQNDLPKILGMCPKILTSSIKSELGPVFDFLSQDLKVPDRSFRRVINKCPRLLTSSVKDQLKPALFYLQRLGFKDLSALAYQDSVLLVSNVERTLIPKLKFLVNLGFSKEETRDMVLRCPTLLTFSIDNNFQPKFDFFVEVMGRKLEELKEFPQYFAFSLENRIKPRHMEIVQNGINMPLSLMLRSTNDEFRELIKRKTGG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0193 304 Pfam mTERF 189 294 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 Pfam mTERF 66 178 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 PANTHER CGI-12 PROTEIN-RELATED 29 299 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 MobiDBLite consensus disorder prediction 12 44 - -
Acco03g0193 304 Gene3D Transcription termination factor 3, mitochondrial 126 302 IPR038538 -
Acco03g0193 304 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 SMART mt_12 216 248 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Acco03g0193 304 FunFam Transcription termination factor MTEF1, chloroplastic 134 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0193 Acco-ChrAcco03 2406450 2407364 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco03g0193 mTERF 4.7e-30 No_clan