Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0162 ATGATGAATTTTTCAATTGGAGGTGGTGGTAAAGGCTCTAACAATCCATGCAGAAAGAAGATCTACCATCGTCACACTCCCTTTCAGATTACACAACTTGAAGCACTTTTCAAGAAGAGCCCTCACCCAGATGAAAACCAACGACGACAATTGGGCAGAGAGCTTGGGCTTGATCCCAAACAAATCAAGTTTTGGTTTCAGAATAAGAGAACTCAAACAAAGACTCAACATGAACGAGAAGATAATGAAATGCTTCGTGCTGAAAATGAAAGGATACAATGTGAGAATATAGCTTTTAGAGAGGCATTGAAGGAAAAGATTTGCCCTTCTTGTGGGGGTTCACCCTATGGCGAAGAAGAACTTGCCCTCCATGTCCAAAGGCTGCAACAAGAGAATGATCAACTCAAAGAAGAGTATGAGAAAGTATCAAACATGCTTGCAAACTGCATTGGCAGACCAATACCCGAACTAGATTCTTCTGGGGATCATTCCTCGGCCGGCTCTCCGCCACTGCCACCGGCGGCTCAGTCACCAGGAAATTCCCTGAACCAGGAGAGTAATGGGAGTCCAAGTCTTGACCTGGACTTAGGATCTGCCATTACAGTCTCAGATGAAAACATGTTACCGTTGTTAATGGGAGAAATCACAGACGTGGAAAAGGATATGATGTTAGAGGCAGCTAACAACGCCATGGATGAATTACTGAAGCTTATGCCTATTGATGAGCCCTTATGGATCAAGACTTCGATTGGTAGTGGACAACTTGTTCTTCATCGTGAGAGCTATGAAAAGTTGTCTAATAGGGCTAATCACTTCGGAAGTTCCAGTGCTCGTCTAGAAGCATCAAAAGAATCGCGAGTGGTTTGGATGAATGCCATGAAATTGGTTGACATGTTCTTAGATCCGGACAAGTGGGTCAATATGTTCCCCACAATTGTTAGAAAAGCTGAAATACTTGAAGTGCTTAACGTTGGAGCATCAGGAAATCGATCTGGAGCTTTGCAACTGATGTATGAAGAGATGCACATTATATCACCAATGGTGGCAGCTCGAGAGTTCTGCTTCATTCGCTACTGTCAACAAGTAGAGACAGGTGTGTGGGTAATAGCTGACGTGTCATTCGATTCCTTGAGAGACAACATCCCTATCTCTCGTACTTGGAAGTTCCCTTCTGGTTGCCTCATTCATGACTTGTCCAATGGGTTCTCCAAGGTTACTTGGATTGAACATGTTGAAGTGGACGATACAACTCAAACACACAAGCTGTTCAGAGATCTCATTTCGGAAATTCTTGCTTATGGGGCAGAAAGATGGGTGGCCACACTTCAAAGAATGTGCGAACGATTTGTGTTTGCCTTGGATAAAAATACTCCACTCCAAGAAGCTCGAGAAGTGATAAGTTCTGGAGATGGAAGGAGGAGCGTAATGAAGCTTTCTAATCGAATGGTGAAGGACTTCTGTGAAGCTCTGAACATGGCAAAGAGGGAGTTCCCTGATTTTTGCGAGGCAAGTAACAGTGGAGTTAGAGTTTCTGTTAGGAGAAATAGAAACAAAGAAAGAGGTCAACCTGAGGGGGTGGTTATTACTACTTCAACCTCATTCTGGCTTCCATTAGGGCATCAGACTGTGTTTGAGTTCTTGATCGATGACCAAAGGCGAGGTCAGTGGGATGTTCTATCTCGTGGCAACTTACGGATTCACCAAATTGCTCGCATCTCCAATGGTTCCCATCCTAGCAACAATATCAGAATTATCCAGCCTTTGAATCCCAATAATGAGAGAAATATGACTATTCTTCAAGAGACTTTCACTGATAGCTTGGGATCTATGCTTGTTTATGCTCCCATCGACCTGCCAATCATAAATATGTGTGGGAGAGGAATGGAGACTTGCCTTATGCCGATCCTTCCGTCGGGCTTCGTCATCTCCAGCGACGGTCCCTGGGGTCGCCGTTCCCGCCCATTATCATTCGCCGGAGATTCTTCTACCGGCTCATCTGAATCCAGCTCAAATAATAACGACGGCGCCTCATCGTCAGCACCACCATCTGGAGGAAGCTTTGTCACAGTGACTTTCCAGATTCTGGCATGCAAGAACGATGACGAGGCTGTCAGGAACCTTAATGTTGAAACTGTCTCGATCATCAACTCTATCCTCAGTTCCGCCGTTGATAACATTAAGGTGGCTTTCAACTGTGCAGGTCTCGATTAA 2211 0.4473 MMNFSIGGGGKGSNNPCRKKIYHRHTPFQITQLEALFKKSPHPDENQRRQLGRELGLDPKQIKFWFQNKRTQTKTQHEREDNEMLRAENERIQCENIAFREALKEKICPSCGGSPYGEEELALHVQRLQQENDQLKEEYEKVSNMLANCIGRPIPELDSSGDHSSAGSPPLPPAAQSPGNSLNQESNGSPSLDLDLGSAITVSDENMLPLLMGEITDVEKDMMLEAANNAMDELLKLMPIDEPLWIKTSIGSGQLVLHRESYEKLSNRANHFGSSSARLEASKESRVVWMNAMKLVDMFLDPDKWVNMFPTIVRKAEILEVLNVGASGNRSGALQLMYEEMHIISPMVAAREFCFIRYCQQVETGVWVIADVSFDSLRDNIPISRTWKFPSGCLIHDLSNGFSKVTWIEHVEVDDTTQTHKLFRDLISEILAYGAERWVATLQRMCERFVFALDKNTPLQEAREVISSGDGRRSVMKLSNRMVKDFCEALNMAKREFPDFCEASNSGVRVSVRRNRNKERGQPEGVVITTSTSFWLPLGHQTVFEFLIDDQRRGQWDVLSRGNLRIHQIARISNGSHPSNNIRIIQPLNPNNERNMTILQETFTDSLGSMLVYAPIDLPIINMCGRGMETCLMPILPSGFVISSDGPWGRRSRPLSFAGDSSTGSSESSSNNNDGASSSAPPSGGSFVTVTFQILACKNDDEAVRNLNVETVSIINSILSSAVDNIKVAFNCAGLD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0162 736 MobiDBLite consensus disorder prediction 153 196 - -
Acco03g0162 736 CDD START_ArGLABRA2_like 220 447 - -
Acco03g0162 736 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Acco03g0162 736 Pfam Homeodomain 21 74 IPR001356 GO:0003677
Acco03g0162 736 SMART HOX_1 18 80 IPR001356 GO:0003677
Acco03g0162 736 Pfam START domain 227 448 IPR002913 GO:0008289
Acco03g0162 736 Gene3D - 10 92 - -
Acco03g0162 736 ProSiteProfiles START domain profile. 216 451 IPR002913 GO:0008289
Acco03g0162 736 MobiDBLite consensus disorder prediction 177 196 - -
Acco03g0162 736 CDD homeodomain 19 77 IPR001356 GO:0003677
Acco03g0162 736 MobiDBLite consensus disorder prediction 653 683 - -
Acco03g0162 736 MobiDBLite consensus disorder prediction 656 683 - -
Acco03g0162 736 SUPERFAMILY Homeodomain-like 12 79 IPR009057 -
Acco03g0162 736 Coils Coil 118 152 - -
Acco03g0162 736 SUPERFAMILY Bet v1-like 471 647 - -
Acco03g0162 736 Gene3D - 224 446 IPR023393 -
Acco03g0162 736 SUPERFAMILY Bet v1-like 217 448 - -
Acco03g0162 736 SMART START_1 225 448 IPR002913 GO:0008289
Acco03g0162 736 Coils Coil 70 90 - -
Acco03g0162 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 731 IPR042160 -
Acco03g0162 736 FunFam Homeobox-leucine zipper protein HDG1 9 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0162 Acco-ChrAcco03 2033969 2042185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0162 18 731 Homeobox Transcription Factor Family AT1G73360 42.428 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco03g0162 START 9.8e-39 CL0209