Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0071 ATGGAAAGAGGTGGATATAGTTATGGTCGCTCCGGCGGCTACCGAGGAGGGCCAGGAGGCCGGCATGGCGGTAGATCAGGTGGAGGACCATCGCGAGGCGGTGGTGGAAGAGGCTTCCGTCCCCAATCGCAGCCTCACAGTGATCGTTCTTGGGACGAGGACACAAGGAGAGGGGGTTATAGCAGGGGAGGGTTTGATAGAGGAGGGAGAGGCAGAGGTAATGGCAGAAATGGTGCTGGATCTTCAGTCCGGGTAGCCAGTGAACCGCTTCAATCTCGTAGTTCTGCTTCCGATCCAGTTCCTGAATTGGAGCGACTACAAATTTCGGAACCGGTTCTAAGCTCAAGTCATACCCAGGATACAGAAGATAAGATTTTCCCAATTCCTAGGCCCGACAAGGGTGGTATATTAAAAATTCAAACTAGCCAGCTTCGTGTCAATCACTTTCCTATCAAGTTTAGACCTGACACCATTCTGATGCATTACCATGTTGATGTGAAGCCGATTTCACCGGGTAGAGCTGGTCGACCTCAAAGAATAACAAAGTCTGACCTCTCTATGATCAGGGAGACATTGTTTTCTAATGACGCTAGGTTGTCATTGGAGAAGACAGCGTATGATGGAGAAAAGAATATTTTCAGTGCGGTTCCTCTTCCAGAAGAAACCTTCAGGGTAACTACCTCAGCAGGAGAGGATGAAAGAAGCAATTCATATCAGGTCACCTTAACACTTGTTAACAAGCTTGAATATCGCAAATTGAACCAATACCTCAATAAGGAGTTTATGTCAATCCCAAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAAGAAAATCCAGCCAACCGTACAATCGGTGTGGGACGTAGCTTCTATCCTTCAAATCCTCCCTTGTTGCATCAGGATCTTCGCCAAGGCATAATTGCTCTAGGGGGATTTCAACACAGTTTGAAGCCCACATCTCAGGGTTTGTCCTTGTGTCTGGACTACTCTGTTTTATCTTTTCGAAAGCGAATGTCAGTCTTGGAGTTCCTACATCAGCGTATTTATGGCTTTAGATTAGAAGAATTTGGTCGTTTCTGGAAACGTGTTTCGACGGAACTGATTGGGTTGAAGGTAAACGTGACACACCGTAGAACCAGACAAAAATACACCATTGTAGGATTATCAGATCGTAACACAAGGTCTATCACCTTTCCTCTTAAGGACCCCGAGGGCCGGAGTGAACCACAACAAGTCTCACTCCTTGATTATTTCTGGGATAAATACAATAAGGATGTTGCATACAAAGATATTCCTTGTTTAAAATTTGGGAAAGAAAACTTAGTGCCGATGGAGTTTTGCATCTTAGTAGAGGGTCAGAGATATCCCAAAGAGAATTTGGATAAAAATGCTGCCAAGACCTTAAAAGATATGTCGGTGGCCCCTCCAAAGGACAGACAACGTGCCATACAAACGATGGTGGAGTCAAGTGACGGACCTTGCGGTGGTGGTATTATTCAAAACTTTGGAATGGAAGTCAACACAACCATGACTGCCGTTTTGGGACGCATTATTGAACCACCAAAATTAAAAGTAGGTGGTCGAAATGGGCAGATTATGACCATTACATTGGATCCGGACAGATGTCAGTGGAATCTGCTTGGAAAATCTGTGATGAAAGGCAAGCCAGTCGAGCGTTGGGGCATTATTGATTTCACAAGCTCAGAGAGAGATTTCCGGTTCAAATTAAGATGCAAGGAATTCGTTCCTAAGCTCAGAGAGAAATTTAGGAGTTTGGGCATTGACATGAAAGATCCTCTCTGGGTTGAGGGATGTTCAATGCATCAACTTGATGGTCATGATTCGCTATCTGCATTACTTAGAGAAGTGAACAATTGGGGACAAGTGCAATTTATTCTGTGTGTGATGACTCAGAAGCACTTTGGATATAAGACACTCAAGTGGATTTCAGAGACTAAGATTGGTGTCGTGACACAATGTTGTTTAACTAATACTGTGAATGGAGGGAAAGATCAGAATCTTACAAATCTTGCTCTCAAGATCAACGCCAAACTTGGAGGTAGTAATGTTGAGCTTGATAATAGGCTCTCTTGTTTTGCAGGTGATGATGGGCATGTTATGTTTATAGGGGCTGATGTCAATCATCCTGCTGCCAGAGACATCAATAGTCCATCGATTACTGCGGTTGTTGGAACTGTCAATTGGCCTGCCGCAAATCGTTATGCGGCACGGGTTAGCCCTCAACCCCATCGAAAAGAACAAATATTGAATTTTGGGACAATTTGCCTTGACCTTGTTGACTGTTACGCCAAGTTTAACAAAGTGAGACCCAAAAAAATTGTCATTTTCCGTGATGGGGTCAGCGAGGGTCAATTCGACATGGTTCTCAATGAAGAACTCCGAGATCTCAAAAGTGTTTTCCAGAATGCAAAGTATTTTCCAACTATAACTTTGGTCGTAGCACAGAAGCGACATCAAACTCGCCTGTTTCGAGAGGAGCCTTCCTTGGGAAATGTGTGTCCTGGAACAGTGGTGGACACAAAAGTGGTACACCCTTTTGAGTTCGATTTCTACCTTTGCAGTCACTATGGAAGCTTAGGGACCAGCAAGCCCACCCACTATCATGTGTTGTGGGATGAACACAGGTTTACCTCTGATGATTTACAGAAACTGATATATGACATGTGTTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTGGTACCTCCTGTGTACTATGCTGACCTTGTTGCTTATCGAGGACGACTATACTATGAGGCGAAGACTGAATTAGAGAGCTTTAAGAGGCCAGCATCGTTTCCTGCTTCATCTGCAAATGAAGACAAGAATTTCAAGCTGCACGAGAACCTGGTGGACATAATGTTCTTTGTCTGA 2901 0.4423 MERGGYSYGRSGGYRGGPGGRHGGRSGGGPSRGGGGRGFRPQSQPHSDRSWDEDTRRGGYSRGGFDRGGRGRGNGRNGAGSSVRVASEPLQSRSSASDPVPELERLQISEPVLSSSHTQDTEDKIFPIPRPDKGGILKIQTSQLRVNHFPIKFRPDTILMHYHVDVKPISPGRAGRPQRITKSDLSMIRETLFSNDARLSLEKTAYDGEKNIFSAVPLPEETFRVTTSAGEDERSNSYQVTLTLVNKLEYRKLNQYLNKEFMSIPRDILQGMDIVFKENPANRTIGVGRSFYPSNPPLLHQDLRQGIIALGGFQHSLKPTSQGLSLCLDYSVLSFRKRMSVLEFLHQRIYGFRLEEFGRFWKRVSTELIGLKVNVTHRRTRQKYTIVGLSDRNTRSITFPLKDPEGRSEPQQVSLLDYFWDKYNKDVAYKDIPCLKFGKENLVPMEFCILVEGQRYPKENLDKNAAKTLKDMSVAPPKDRQRAIQTMVESSDGPCGGGIIQNFGMEVNTTMTAVLGRIIEPPKLKVGGRNGQIMTITLDPDRCQWNLLGKSVMKGKPVERWGIIDFTSSERDFRFKLRCKEFVPKLREKFRSLGIDMKDPLWVEGCSMHQLDGHDSLSALLREVNNWGQVQFILCVMTQKHFGYKTLKWISETKIGVVTQCCLTNTVNGGKDQNLTNLALKINAKLGGSNVELDNRLSCFAGDDGHVMFIGADVNHPAARDINSPSITAVVGTVNWPAANRYAARVSPQPHRKEQILNFGTICLDLVDCYAKFNKVRPKKIVIFRDGVSEGQFDMVLNEELRDLKSVFQNAKYFPTITLVVAQKRHQTRLFREEPSLGNVCPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDDLQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYEAKTELESFKRPASFPASSANEDKNFKLHENLVDIMFFV 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0071 966 Gene3D - 518 695 - -
Acco03g0071 966 Gene3D - 703 966 IPR036397 GO:0003676
Acco03g0071 966 SUPERFAMILY PAZ domain 335 490 IPR036085 GO:0005515
Acco03g0071 966 MobiDBLite consensus disorder prediction 80 98 - -
Acco03g0071 966 CDD Piwi_ago-like 499 927 IPR045246 -
Acco03g0071 966 SMART DUF1785_2 285 338 IPR014811 -
Acco03g0071 966 MobiDBLite consensus disorder prediction 46 63 - -
Acco03g0071 966 CDD PAZ_argonaute_like 339 451 - -
Acco03g0071 966 Pfam PAZ domain 359 465 IPR003100 GO:0005515
Acco03g0071 966 Gene3D paz domain 334 456 - -
Acco03g0071 966 Pfam Argonaute linker 1 domain 286 337 IPR014811 -
Acco03g0071 966 Pfam N-terminal domain of argonaute 143 275 IPR032474 -
Acco03g0071 966 SUPERFAMILY Ribonuclease H-like 628 928 IPR012337 -
Acco03g0071 966 MobiDBLite consensus disorder prediction 1 129 - -
Acco03g0071 966 Pfam Piwi domain 632 927 IPR003165 GO:0003676
Acco03g0071 966 ProSiteProfiles Piwi domain profile. 632 928 IPR003165 GO:0003676
Acco03g0071 966 ProSiteProfiles PAZ domain profile. 363 452 IPR003100 GO:0005515
Acco03g0071 966 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 140 931 - -
Acco03g0071 966 SMART PAZ_2_a_3 339 478 IPR003100 GO:0005515
Acco03g0071 966 SMART Piwi_a_2 632 928 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0071 Acco-ChrAcco03 738690 742436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0071 86 931 Eukaryotic Initiation Factors Gene Family AT1G48410 35.044 1.38e-145 458