Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0066 ATGAAAGAAGGAGGAAGGAAGCAGGGTGCTGCATCACCGTGTGCGGCTTGCAAACTGCTTCGAAGAAGATGTGCTAACGACTGTGTCTTTGCTCCTTATTTCCCTGCCGATGAGCCTCACAAGTTCGCTAATGTCCACAAAGTCTTCGGAGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGAGTATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAAGCAAATGCAAGAGTGAGAGATCCAGTGTATGGGTGTGTTGGGGCCATTTCTTCTCTTCAGCAACAGATTGATTTGCTTCGGACCCAATTGGCCTTAGCCCAGGCTGAGGTGGTTCATCTTAGGGTTAGCCAATCTGCTTCCCTTTCCAACCATGGGCTCAGCCCAACCAGCAGCGACTCGCCGCCGCCTTCAAAGTCCATTCTCGACATGGACTTTGTGATGGACCAGTCCACTTACTCTGATTCGGTAAAATGCATTTTAAATTGTAAACACAGATTTTATGGGCCTCATGATTTAAGATCAGTCTGA 537 0.4804 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPEYQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLRTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPPSKSILDMDFVMDQSTYSDSVKCILNCKHRFYGPHDLRSV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0066 178 Coils Coil 92 112 - -
Acco03g0066 178 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Acco03g0066 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 128 - -
Acco03g0066 178 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0066 Acco-ChrAcco03 669529 672420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0066 1 129 AS2 family AT1G31320 86.822 2.48e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco03g0066 LOB 5e-43 No_clan