Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0042 ATGTTTCTCTTAGTTTGTTTATTTACGAAGAGCCTCATTACCCCAAGCATCCGTGATTCTGTGGTATCTTCTGCGGTTTCCAAAATCTCCGGCGAGCAAAGTGTTATCTTTACTGTGATACATACGTGCCACATTGCCGCCGTTTCTTCTCCTTTTGTCCCTAGACTTCACCTTCATTCAGATCTGAGAAATAGCTGTGTTTGCTGGAGACTGACTCAGATAAGCAAGAGCTTGAGGTGGGCTTTCACTTGCATCTACTGTTGTAGCTCACACGGCCTCTCAAGGGTAAATCCATATGCCATAGATGATTTTGCCTGTTTCTATGGACTTGATTTGCTTGTTCCAATTTATCCTCGAGGAATGGCCATGATGGGGAGGGAGGGACTGTTCCATGTGCTGAATCTAGCGATAATTTCAGTGATCCTAGCTTCTGGGAAAGCTCAATCAGAGTCGATTTTTATTAATTGCGGTTCAAATTCCTCCGTAAATGCTGATGATAGAAGGTGGATTGGGGATACGGCCCCGAATAATAACATCACCCTTAGTTCTCCTGGTATTGCTGCTTTAGCCTCTGCATTAAGTGGCAATTCTTCCTTTGACCCTCTCTACACAACCGCCAGGATTTTCACTGATGCTTACAATTACACAATTAAAGGCGTTCAGGGAAACCATGTTCTTAGGCTCCATTTCTGTCCCTTTGTGTTTGAGGACTACAATGTAAATGAGTCCTCATTTGATGTTGCGGCCAATGGTCTGAAACTACTGACGGAGTTCAATGTTCCTGGAGAGATATCACACAAGAATATGTACTTGCTGAATTCTGGAAGCAATTCAACTTCATTTTTCTTGATTAAAGAATATATTCTTGCTGTCAATTCAGGTGAGCTTGTGATTGAACTCATCCCAACAAAAAAGTCATTTGGCTTTATTAATGCTATTGAGATTGTCCCAGTTCCAGATGAGCTTTTTGTAGGCTCTGTCAATAAAGTTGGAGGAAGCGATGAGAATTTGAATTTGATTGGACGTGGGATGGAGACCATGTACAGGTTGAATGTTGGTGGTCCCGAAATCGCATCCAATGAGGATAAAGATATCTGGAGAACATGGAAAGTGGATTCTGGCTACATGATCATAGAAAGTGCTGGGTCAGGACTAAAGAACAAGTCTAATATAACGTATGCTTCAATGAATGATTCTTCAGTGGCTCCACTCATTGTGTATGAGACTGCAAGGACGATGTTTGACACTCAAGTTTTGGAGAAAAGGTTTAACTTATCGTGGAAGTTTGAAGTGGATCCTGATTTTGAGTATATGATCCGGTTACATTTCTGTGAGCTGGACTTTGACAAGGCAAATGAGAGAATTTTTAGGATCTATATAAACAACAAGACAGCAGCAGATAATGTTGATATTTTTTTACTAGCAGGAGGGATGAATAAAGCATATCATCAGGATTATGTAGATGGTGTGTCCTCAAGAATCAACACATTATGGATTCAGTTAGGTCCTGATTCAGCTGCTGGTGCTGCTGGAACTGATGCTCTTTTAAATGGGCTTGAAATTTTCAAGATCGGTCGAAATGGGAATCTGGCCCATGTCGAGAGATATGGTTCAGCTGGCAATTCGGCTAGCAAATCAAAAACAAGGATTCTTTGGATGGCAATTGGAACAGGTCTAGCTTCTGTTGCCATAATTATGTTAATGGTTGCTCTGTTTTTCTGGTTTTGCAAAAGAAGCAGGAAAACAACAAGTGATACCAAAAGCAATGCTCCTGGTTGGCGGCCATTGTTCCTTTATGGTGGTACTGTAAACAGCACTGTTAGTGCCAAGGGATCAGCAGGACATCAGAATCCATACGGATCAGTGGCATCAACCCGACTTGGAAAGCGGTTTACATTAGCAGAAATTCGTGCTGCAACAAAAAATTTTGATGAGAGTTTGATAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGAGAGGTTGATGATGGGGTCCCTGCTGCAATTAAGCGAGCCAACCCGCAGTCTGAGCAGGGTCTGGCTGAATTTGAGACAGAGATTGAGATGCTTTCCAAACTCAGGCATAGGCATCTGGTGTCCCTGATTGGATTCTGTGAAGAGCAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGTACTCTCAGAAGTCATCTATTTGGGAGCGATCTTCCACCATTAACTTGGAAGCAGCGCCTAGAAGTGTGCATAGGTGCTGCAAGAGGACTCCATTATCTGCATACAGGTGCAGAGCGTGGAATAATCCACAGGGATGTCAAGACAACTAATATATTGTTGGATGAGAACTTTGAAGCTAAAATGTCTGATTTTGGTTTATCGAAAGATGGTCCTGCTCTGGAGCATACTCATGTCAGCACAGCTGTGAAAGGAAGTTTTGGTTACCTAGACCCTGAGTACTTCAGACGGCAGCAGCTAACAGAGAAATCAGACGTGTACTCTTTTGGTGTTGTGTTGTTTGAAGTTGTTTGTGCCCGAGCTGTGATAAATCCTACGTTGCCGAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGGTGGCAGAGGCAGAGATCGCTTGAAACTATCATTGATCCACGTCTTGCAGGCGGCTATCATCCAGAGTCCTTGTTTAAGTATGGAGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAGAATAGGCCCACAATGGGGGAGGTGTTGTGGCACCTGGAGTATGTTCTTCAGCTTCATGAAGCTTGGTTGAACACTAGCAGCAGAGACGCTTCATTCTCGAGCAGTCAAGCTTTAAGAGGAGAGAAAGAGGGTAAACCAGAAGAGATACAGGAGCCATTGGCCAGTGTAGTTGAAGAGAACAGCTCTGCCACAAGAGGGGTCAAAGAAATGGATGCTGCAACTTGA 2928 0.4296 MFLLVCLFTKSLITPSIRDSVVSSAVSKISGEQSVIFTVIHTCHIAAVSSPFVPRLHLHSDLRNSCVCWRLTQISKSLRWAFTCIYCCSSHGLSRVNPYAIDDFACFYGLDLLVPIYPRGMAMMGREGLFHVLNLAIISVILASGKAQSESIFINCGSNSSVNADDRRWIGDTAPNNNITLSSPGIAALASALSGNSSFDPLYTTARIFTDAYNYTIKGVQGNHVLRLHFCPFVFEDYNVNESSFDVAANGLKLLTEFNVPGEISHKNMYLLNSGSNSTSFFLIKEYILAVNSGELVIELIPTKKSFGFINAIEIVPVPDELFVGSVNKVGGSDENLNLIGRGMETMYRLNVGGPEIASNEDKDIWRTWKVDSGYMIIESAGSGLKNKSNITYASMNDSSVAPLIVYETARTMFDTQVLEKRFNLSWKFEVDPDFEYMIRLHFCELDFDKANERIFRIYINNKTAADNVDIFLLAGGMNKAYHQDYVDGVSSRINTLWIQLGPDSAAGAAGTDALLNGLEIFKIGRNGNLAHVERYGSAGNSASKSKTRILWMAIGTGLASVAIIMLMVALFFWFCKRSRKTTSDTKSNAPGWRPLFLYGGTVNSTVSAKGSAGHQNPYGSVASTRLGKRFTLAEIRAATKNFDESLIIGVGGFGKVYKGEVDDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFEAKMSDFGLSKDGPALEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPRLAGGYHPESLFKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLNTSSRDASFSSSQALRGEKEGKPEEIQEPLASVVEENSSATRGVKEMDAAT 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0042 975 MobiDBLite consensus disorder prediction 934 975 - -
Acco03g0042 975 SMART serkin_6 643 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0042 975 ProSiteProfiles Protein kinase domain profile. 643 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0042 975 Gene3D - 149 318 - -
Acco03g0042 975 Gene3D - 343 525 - -
Acco03g0042 975 FunFam Receptor-like protein kinase FERONIA 343 526 - -
Acco03g0042 975 PANTHER OS07G0166700 PROTEIN 629 920 IPR045272 GO:0004714|GO:0006468
Acco03g0042 975 CDD STKc_IRAK 649 914 - -
Acco03g0042 975 Gene3D Phosphorylase Kinase; domain 1 605 718 - -
Acco03g0042 975 Gene3D Transferase(Phosphotransferase) domain 1 719 937 - -
Acco03g0042 975 FunFam receptor-like protein kinase FERONIA 607 718 - -
Acco03g0042 975 SUPERFAMILY Protein kinase-like (PK-like) 619 915 IPR011009 -
Acco03g0042 975 FunFam Receptor-like protein kinase FERONIA 719 933 - -
Acco03g0042 975 Pfam Malectin-like domain 154 524 IPR024788 -
Acco03g0042 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Acco03g0042 975 ProSitePatterns Protein kinases ATP-binding region signature. 649 671 IPR017441 GO:0005524
Acco03g0042 975 Pfam Protein tyrosine and serine/threonine kinase 649 857 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0042 Acco-ChrAcco03 459786 462847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0042 121 965 Receptor kinase-like Gene Family AT1G30570 63.325 0.0 1105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco03g0042 Malectin_like 6.9e-35 CL0202