Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0040 ATGCTGGTCTCTACCTCCGTTCTGGAACTTCACAGATATACTGTAATGTTGCTGATCTGGAGAAGCATTTGGATTTCATTGCTTAAATCGTAAGTGTTTGACGTCGTGTGCGGATTTGAGTTCGACGGCTCATTATCTTCTTTCATGAGGTTGAGATTGCTTCTACAAAAATTGCGCTTTCCCATTGTAGTGGAAGAAGTGGTGAAAATGAAGCTCTTTAGGCTTTTGGTTTTATCCTTATCTTTCTTCTCTGTCATGGGACAGCTTCCTTCTCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAAGAATCCATTGACTTCAATGGATGCCCTTCTTCATGGAATGGAGTTCTGTGCAATGGTGGTAATGTTGCTGGGGTTGTCCTAGATAACCTGGGTCTCTCTGCTCAGGCAGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTTAGGCTCTCCTTGTCCAACAATTCCATATCAGGAACACTCCCTAACAACATAGGAGACTTCAAAAGTCTTCAATTTCTAGATGTCTCCAATAACCTTTTCTCTTCTTCCATTCCACAGGGATTTGGTAAGCTAGCTAGCTTACAGAACTTGTCATTGGCAGGGAATAATTTCTCTGGCTCAATTCCTGTCTCAATTGCAGGGATGTCATCAATCCAATCTCTGGACTTGAGCCGTAACTCTTTTTCTGGTGCGCTGCTAGTTTCATTGACTAAGCTGAATAGCCTGGTATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAGATTCCCAAAGATTTCGATTTGATGTCTGCTCTTGACAAGATTGACTTGCACGGGAATATGCTTGATGGTCAACTAGATATTAAATTCATGCTTTTTACAAGTGCCAGTTATGTTGATTTTAGTGATAATATGCTAGTGAGTTCTAACTCCCCCCAGCAGAGGTTTCTACCCCGAATCTCTGAAAGCATCAAGTATTTGAATCTAAGCCACAACCAGCTGATTGGATTGTTGGATGGTGGAGGCAAGCAGCCGCTTTTTGAAGAACTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAACTGCCTGAATTTGAATTTGTCTATGATCTCCAGGTCCTTAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAAATGGCCTGCTCAAGGGAGACCCTCTGGTCATAACCGAACTTGATTTGAGTGCCAACAATCTTTCAGGACCAATAGGATTAATCACATCAACAACATTGCTCTTTCTGAATCTCTCATCAAATGGTTTCACTGGTGAGCTGCCACTTCTAACAGGGAGCTGTGCAGTTCTCGATCTTTCAAATAACAAACTAGAAGGAAATTTAACCAGGATGGTGAAATGGGGAAATTTAGAATTTCTTGATCTCAGCAGGAATCATTTGACCGGGCCCATTCCTGAGGAAACTCCTCAATTTTTACGATTGAATTATCTGAATTTCTCCCATAATTCTCTTAGCAGCTCCCTCCCCAGGGTCTTAAAGCAGTATCCAAAGCTAAGAGTGCTTGATGTTAGTTCCAACCAGTTAGATGGACAGCTTCCTGATAAGCTGCTCGATATGCCAACTTTGCAAGAGCTTCACATTGAGAATAATTTTGTTTCAGGCAGCATTAATTTAGCATCTGCCTCTAGTCAATCTGATCTCCGGATTCTTGATCTTTCTCACAACCAATTTAATGGGTACTTTCCTGAAAATTTTGGATCATTAGCAGGCCTGAAAGTGCTCAAAATTGCTGGAAATAATTTTTCTGGCTCTCTTCCTACTTCCATTGGCATGAGTTCATTAGATTCGTTAGATATATCAGAGAATCATTTTACAGGTCCGTTACCAACTGACCTGCCAAAGGGACTGGAAAACTTTAATGCTTCATACAATGATCTGTCGGGTATTGTCCCAGAAAATCTTAGGAAGTTCCCTAGTGCTTCTTTCTTTCCTGGGAATGCTAGGTTGCATTACCCAAATGGTCCTCCTGGATCAACCAATATGCCTGCTGTAGGTTCCAGGAAGAAGCCTATGAGCACTATCATTAAAGTAATAATTATAGGATCATGTGTGGTTGGACTGTTCATTGTAATCCTGCTTGCAATCTTCATACATTACATACGCATATCAAGATCTCCACCAGAATATGCTGCTAGTAAGGACATACATGGGCATGCTGAACCAAACTTACCTGGCATAGGCCGTACAACAGACAGGGGTGGTGCTTTGGTTGTTTCAGCTGAGGATCTTGTGACCTCAAGGAAAGGATCATCTTTGGAGATAATCAACCCAGATGAAAAGTTGGCAGCCACAACTATGTCTCCGTCAAAAAACAGCCACTTTTCCTGGTCGCCAGGGTCTGGTGATTCATTCACTGCTGAAAATTTTGCAAGACTTGATGTGGGATCACCTGATAAGTTAATTGGCGAGCTGCATTTTCTTGATGATGCTATAACATTGACCCCTGAGGAGCTTTCAAGGGCCCCTGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCATATAAGGCTACTCTGGAGAATGGCTTGTTTCTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGAAAAGAGTTTGCTAAAGAGGCTAAAAAGTTTTCAAACATCAGGCATCCGAATGTTGTGGGATTGAGAGGATATTATTGGGGTCCTACACAGCACGAGAAGCTTATTCTTTCAGACTACATTTCTCCTGGAAGTCTAGCAACTTTTCTTTATGATCGGCCTGGAAGAAAAGGTCCACCATTAACCTGGGCCCAGAGGCTCAAAATAGCAGTTGATGTGGCACGTGGCCTGAACTATCTCCACTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCAACAAATGTGCTGTTGGATACACCTGATTTGAATGCAAGAGTTGCTGACTATTGCCTTCACCGGCTCATGACTCAGGTCGGTACTACTGAACAGATTCTTGATGCTGGGGTTTTGGGATATCGCGCACCAGAGTTAGCTGCTTCCAAGAAGCCAACCCCCTCCTTTAAATCGGATGTTTATGCCTTTGGAGTGATACTGTTGGAGCTTTTAACTGGAAGGTGTGCTGGTGATGTGATATCAGGTGAGGATGGAGGTGTTGATATGACTGACTGGGTAAGGTTGCGTGTGGCTGAAGGCAGAGGATCAGAATGTTTTGATGCTGCATTGATGCCAGAAATGGGAAACCCAATTGCAGAAAAGGGAATGAAGGATTTTCTGGGAATAGCTCTGCGATGCATTCGGTCTGTTTCAGAGAGGCCAGGTATCAAGACAATATATGAAGACCTTTCATCTATATAG 3393 0.4271 MLVSTSVLELHRYTVMLLIWRSIWISLLKSXVFDVVCGFEFDGSLSSFMRLRLLLQKLRFPIVVEEVVKMKLFRLLVLSLSFFSVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFNGCPSSWNGVLCNGGNVAGVVLDNLGLSAQADLSVFSNLTKLVRLSLSNNSISGTLPNNIGDFKSLQFLDVSNNLFSSSIPQGFGKLASLQNLSLAGNNFSGSIPVSIAGMSSIQSLDLSRNSFSGALLVSLTKLNSLVSLNLSHNSFTGKIPKDFDLMSALDKIDLHGNMLDGQLDIKFMLFTSASYVDFSDNMLVSSNSPQQRFLPRISESIKYLNLSHNQLIGLLDGGGKQPLFEELKVLDLSYNQLSGELPEFEFVYDLQVLRLSNNRFSGFLPNGLLKGDPLVITELDLSANNLSGPIGLITSTTLLFLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLTRMVKWGNLEFLDLSRNHLTGPIPEETPQFLRLNYLNFSHNSLSSSLPRVLKQYPKLRVLDVSSNQLDGQLPDKLLDMPTLQELHIENNFVSGSINLASASSQSDLRILDLSHNQFNGYFPENFGSLAGLKVLKIAGNNFSGSLPTSIGMSSLDSLDISENHFTGPLPTDLPKGLENFNASYNDLSGIVPENLRKFPSASFFPGNARLHYPNGPPGSTNMPAVGSRKKPMSTIIKVIIIGSCVVGLFIVILLAIFIHYIRISRSPPEYAASKDIHGHAEPNLPGIGRTTDRGGALVVSAEDLVTSRKGSSLEIINPDEKLAATTMSPSKNSHFSWSPGSGDSFTAENFARLDVGSPDKLIGELHFLDDAITLTPEELSRAPAEVLGRSSHGTSYKATLENGLFLRVKWLREGVAKQRKEFAKEAKKFSNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLATFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDLNARVADYCLHRLMTQVGTTEQILDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGEDGGVDMTDWVRLRVAEGRGSECFDAALMPEMGNPIAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0040 1130 Gene3D Ribonuclease Inhibitor 92 210 IPR032675 -
Acco03g0040 1130 Gene3D Ribonuclease Inhibitor 211 282 IPR032675 -
Acco03g0040 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 451 683 - -
Acco03g0040 1130 SUPERFAMILY RNI-like 340 664 - -
Acco03g0040 1130 FunFam Pollen receptor-like kinase 1 926 1130 - -
Acco03g0040 1130 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 89 334 - -
Acco03g0040 1130 SMART LRR_typ_2 258 281 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 210 234 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 162 185 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 383 407 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 360 382 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 186 209 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 475 499 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 523 547 IPR003591 -
Acco03g0040 1130 SMART LRR_typ_2 619 647 IPR003591 -
Acco03g0040 1130 Pfam Leucine Rich Repeat 260 279 IPR001611 GO:0005515
Acco03g0040 1130 SUPERFAMILY L domain-like 112 449 - -
Acco03g0040 1130 ProSiteProfiles Leucine-rich repeat profile. 362 384 IPR001611 GO:0005515
Acco03g0040 1130 Gene3D Transferase(Phosphotransferase) domain 1 927 1130 - -
Acco03g0040 1130 SUPERFAMILY Protein kinase-like (PK-like) 851 1127 IPR011009 -
Acco03g0040 1130 Pfam Leucine rich repeat 575 632 IPR001611 GO:0005515
Acco03g0040 1130 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
Acco03g0040 1130 Pfam Leucine rich repeat 195 246 IPR001611 GO:0005515
Acco03g0040 1130 MobiDBLite consensus disorder prediction 739 759 - -
Acco03g0040 1130 ProSiteProfiles Protein kinase domain profile. 848 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0040 1130 Pfam Protein tyrosine and serine/threonine kinase 852 1049 IPR001245 GO:0004672|GO:0006468
Acco03g0040 1130 FunFam Leucine-rich repeat receptor-like protein kinase 833 925 - -
Acco03g0040 1130 PANTHER OS07G0626500 PROTEIN 76 1130 - -
Acco03g0040 1130 Gene3D Phosphorylase Kinase; domain 1 842 925 - -
Acco03g0040 1130 Pfam Leucine rich repeat N-terminal domain 91 136 IPR013210 -
Acco03g0040 1130 Gene3D Ribonuclease Inhibitor 305 688 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0040 Acco-ChrAcco03 440274 445016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0040 134 621 Receptor kinase-like Gene Family AT1G75820 28.952 3.14e-39 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco03g0040 PK_Tyr_Ser-Thr 2.5e-28 CL0016