Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0034 ATGATTGTGCGTTGGGCAGGGCTCTGTTCATTCCCACAAAAGAAAGTCTTCTTTGGAGACTCTTGTCAATCCTCCTGCATCCAAGTGAAATCGGCCTTAAATGCATTGTCGGCTGTTTTTGAGTCATTTTCTCTTCGCCCTTTTGATCAATCGCTAGCCTGGGTTCTCCATCACAATGAATTTGCAATGACATTTAAAAATGTGAGGCGTGACTGGTGTAGATTTGTCTCTTTCACTGATATTATTCCATTGAGATCTGCTGATATGACACTTAGAGAAAGAGAGGATGTGCTGATATGGCACTTGGAGAAAGAAAGCTTTCAGCCAAAAGAATACTTCACTAGAGATGAAAAAGATGATGAGGATGAGGATAACAATAACAATGAAAATGAGCACGCTGCCGATGAAGGAGAAGATGAAGATGCTGAGGTTGGCGATGTTCTTGAAGATGAGGCAGAGTACTTGTTAGGAGACGAAGGTCCAACTTCTACAGAGGGGGAACTTGAAAAAGGTCTTCCAGCAGAAGATGGAGATGAGGATAATAAGGCTGCTAGACATTTCAGCCATGGATCTTACCTAGTCCAAGGAAAGTTAGACCATGGAATGGAGGATTATATTTTTGCTGAACACAGGAACATCAATGGCTACGACTTAGGGCTATATGCAATTTTCGATGGCCACGCTGGTCAAGCTGTGGCAAAATACTTGCAAGGCCATCTATTTGAAAGAATATTAAATGAGGTATGTGACATGTCCTTTGATCATTTTGAGCCTGAGTTTTGGAAAAATCCAGTACGTGTGCTTAAGAGATCATGCAGGGCTATGGATGAGGAGATCCTAGAAAAGATAGGAAATTCACGAGGGGGATCAACAGCTGTTGTAGGAATACTTGTTAATGGAGTGAAGTTACTGGTAGCCAACGTGGGAGATTCTCGAGCGATATTATGCAGAAACAGTGTGGCTAAACAAATCACATTCGATCATGAGCCTCAGGGAGAAATATCTTGGTGTGTTCCGAGAGTGGATGGGGTATTAGCAATGAGCAGGGCATTTGGGGATGGAAGATTGAAGGAACACATTACTGCAGAACCAGATGTGATGGTTCAAAACATCACTGACGACACTGACTTCATCATTTTGGCTAGTGATGGCCTCTGGAAGGTGATGACGAACCAAGAGGCATGCGAGTGCGTGAAGGATATGGATGATGCAAGAAAAGCAGCTAAGAATTTGGTTAAAGAATCATTAGCTCAAGGAAGCTATGATGATATTTCATGCATTGTTGTAATGTTTTAG 1296 0.4228 MIVRWAGLCSFPQKKVFFGDSCQSSCIQVKSALNALSAVFESFSLRPFDQSLAWVLHHNEFAMTFKNVRRDWCRFVSFTDIIPLRSADMTLREREDVLIWHLEKESFQPKEYFTRDEKDDEDEDNNNNENEHAADEGEDEDAEVGDVLEDEAEYLLGDEGPTSTEGELEKGLPAEDGDEDNKAARHFSHGSYLVQGKLDHGMEDYIFAEHRNINGYDLGLYAIFDGHAGQAVAKYLQGHLFERILNEVCDMSFDHFEPEFWKNPVRVLKRSCRAMDEEILEKIGNSRGGSTAVVGILVNGVKLLVANVGDSRAILCRNSVAKQITFDHEPQGEISWCVPRVDGVLAMSRAFGDGRLKEHITAEPDVMVQNITDDTDFIILASDGLWKVMTNQEACECVKDMDDARKAAKNLVKESLAQGSYDDISCIVVMF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0034 431 MobiDBLite consensus disorder prediction 111 143 - -
Acco03g0034 431 SMART PP2C_4 181 429 IPR001932 -
Acco03g0034 431 SUPERFAMILY PP2C-like 185 431 IPR036457 -
Acco03g0034 431 MobiDBLite consensus disorder prediction 163 183 - -
Acco03g0034 431 MobiDBLite consensus disorder prediction 117 143 - -
Acco03g0034 431 CDD PP2Cc 187 429 IPR001932 -
Acco03g0034 431 ProSitePatterns PPM-type phosphatase domain signature. 220 228 IPR000222 GO:0043169
Acco03g0034 431 Pfam Protein phosphatase 2C 200 424 IPR001932 -
Acco03g0034 431 Gene3D - 170 431 IPR036457 -
Acco03g0034 431 PANTHER PROTEIN PHOSPHATASE 139 429 IPR015655 GO:0004722|GO:0006470
Acco03g0034 431 SMART PP2C_SIG_2 199 431 IPR001932 -
Acco03g0034 431 ProSiteProfiles PPM-type phosphatase domain profile. 188 431 IPR001932 -
Acco03g0034 431 MobiDBLite consensus disorder prediction 156 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0034 Acco-ChrAcco03 390970 393616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0034 177 431 PP2C-type Phosphatase Gene Family AT4G28400 46.468 9.59e-80 245