Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0009 ATGGAGGATACTCAAGTATATATGTCACATCCTCGTGGCTTGGTTTGTGTTCCGCCATGGGACACCCCTATAGTTGGGTTATCAATGTTTAGAAGAATTCATGATTCGTATGCTGCAGCTCATGGGTATTGCTATGCTTGGCCAAAGCGACATACCAAGCATTGAAGGACTTATCTGTTTGAATCGACAATTCTTGGTCTTGGATTCGACCTTCTGCTCGTCTTCTCTGGGGATATTTCCTTTGCTTCCTTGGTTGTCAGAATTGTTTTTCGGGACGAATTCAGGAACCGGAGTGGTGTTTTGGTTTTTAACTGTGAAGCCATGCAGAGCCAGCTTGTGTGTAGTGGATGTAGGAGCATTTTGCTTTATCCTAGAGGGGCAACCAATGTTTGTTGTGCATTATGCAACACAGTTACCTCAGTTCCTCCACCTGGTAAGCTCCTTTTCCTTTGTTATTATTTCAAAGTTAGAAGTATTTAG 480 0.4292 MEDTQVYMSHPRGLVCVPPWDTPIVGLSMFRRIHDSYAAAHGYCYAWPKRHTKHXRTYLFESTILGLGFDLLLVFSGDISFASLVVRIVFRDEFRNRSGVLVFNCEAMQSQLVCSGCRSILLYPRGATNVCCALCNTVTSVPPPGKLLFLCYYFKVRSI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0009 159 NCBIfam zinc finger domain, LSD1 subclass 111 141 IPR005735 -
Acco03g0009 159 Pfam LSD1 zinc finger 114 138 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0009 Acco-ChrAcco03 191956 194962 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Acco03g0009 zf-LSD1 1.7e-11 No_clan