Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0004 ATGGATAACGAAATTCTTGAATTTGACATTGGGTTGGGTGGAGAAGGAGATGGCCTCGGCGACGATGATGGGGTTGACATGGAGCAACCCGTCGATGAGGACGATTTGGCCTATAGCCCTGCTCCTAGCAGTGGTGGTGGAGGTGCTATTGGTAGTGGTGAGATATATCTTCCTGAGGGTGACCTCTCGGATCTCGAACCTTACGAGGGTATGGAATTCGAGTCTGAGGAGGCAGCGAAGGCCTTCTATAACTCCTACGCGCGTCGTGTTGGATTCAGTACCCGTGTCAGCTCATCCCGCCGCTCCAGACGTGATGGAGCTATTATTCAGAGACAATTTGTTTGCGCAAAGGAGGGTTTCCGCAATTTGAATGAGAAACGCACCAAGGATAGAGAGATTAAGCGCCCACGAACTATCACCAGAGTGGGATGCAAAGCGTCCTTGTCTGTGAAAATGCACGACTCTGGCAAGTGGATCGTTTCAGGGTTTGTCAGAGAACATAACCACGAACTCGTTCCACCCGATCAGGTGCATTGTCTTCGCTCTCACAGACAAATATCAGGAGCTGCTAAGACGCTGATTGACACTTTACAGGCTGCTGGGATGGGTCCTCGTAGAATCATGTCAGCTCTCATTAAAGAATACGGAGGGATAAGCAAAGTCGGTTTTACGGAGGTTGACTGTCGGAATTACATGAGGAATAATCGCCAGAGAAGTTTGGAAGGAGATATTCAACTTGTTCTGGATTATTTGAGACAAATGCATTCTGAAAACCCTAATTTCTTCTATGCTGTGCAAGGTGAGGAGGATCAGTGCGTGAGCAACGTTTTTTGGGCTGATCCTAAGGCGAGAATGAACTATACATTTTTTGGTGATACCGTCACTTTTGACACTACTTACAGATCTAATAGATACCGGCTACCCTTTGCCCCCTTCACTGGTGTCAATCATCATGGACAACCTGTTCTGTTTGGATGTGCTTTCATTATAAATGAATCTGAAGCATCATTCATATGGCTTTTTAAGACATGGCTTATGGCAATGTCTGGACGTCCTCCAGTGTCAATAACCACTGATCATGATTCTGTACTAAGGTCAGCCATAATACAAGTATTCCCTGAGACTCGTCACCGTTTCTGCAAGTGGCACATCTTTAAAAAGTGTCAGGAGAAGTTATCTCACATTTTTCTCAAACATCCTAATTTTGAAGCTGAATTTCACAAATGTGTTAACTTGACTGAGTCAATTGAGGAATTTGAGTCTTGTTGGTTGACACTTATTGATAGATATGATCTAAGGGACCATGAATGGCTTCAGTCAATTTATTCTTCCCGCCGGCAGTGGGTACCTGTGTATTTGCGAGACACATTCTTTGCAGAAATGTCCATAACCCAGCGAAGTGATGGCATGAACTCATATTTTGATGGCTATGTCAATGCTTCCACCAATTTGAACCAATTTTTTAAGCTATATGAGAAAGCACTTGAAAGTCGCAATGAGAAAGAAGTAAGAGCCGACTATGACACAATGAATACTTTGCCCATATTGAGGACTCCATCTCCAATGGAAAAACAAGCATCTGAGCTGTACCCAAGAAAAATTTTCATGAGGTTCCAAGAAGAGTTAGTTGGGACATTGACATTCATGGCATCCAATGCTGAGGATGATGGAGAGGTCATTACATATCATGTTGCGAAATTTGGAGAGGATCATAAAGCATACTATGTTAAATTCAATGTTTTGGAGATGAGAGCAACTTGTAGCTGCCAAATGTTTGAATTCTCTGGTCTTCTATGCAGACACGTTTTGGCTGTCTTTAGAGTAACCAATGTGCTTACTCTCCCATCTCACTACATATTGAAACGTTGGACCAGAAATGCCAAGAGCAATGTAATATTAGAAGACCATTCTACTGATGTATATACGTATTATTTGGAATCTCATACTGTTAGATATAATACCCTGCGGCATGAGGCCTTAAAATTTGTTGATGAAGGAGCAAAGACTCTTGAAAATTATGATGTGGCCATGGTTGCATTGCAAGAAGCTTCAAAAAGAGTTGCGGAAGCAATAAAAAATGAGGGAAGAACTCCCATCAGCAATGGAAAAGTTCGAAGTGGTTTGCTGAATGTTGGAAATCATAGAGATTATACTAGGGGGATCCATGAAGAAAGCTTGATCCAGCATATGTCGGAGGATGATATGGACAAGAATATTAGAGAACTTACGAATGAGCTTCAATCTGCAAACCGCAAGTGTGAAATTTACCGGTCCAACCTGCTTTCGGTTTTGAAAGCTGTCGAGGATCACAAGTCGGAGTTGTCAGTTACGGTGCAAAACATTAAGATCAGCATGAAAGATGGTTTTTGA 2370 0.4266 MDNEILEFDIGLGGEGDGLGDDDGVDMEQPVDEDDLAYSPAPSSGGGGAIGSGEIYLPEGDLSDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHSENPNFFYAVQGEEDQCVSNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFIINESEASFIWLFKTWLMAMSGRPPVSITTDHDSVLRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLKHPNFEAEFHKCVNLTESIEEFESCWLTLIDRYDLRDHEWLQSIYSSRRQWVPVYLRDTFFAEMSITQRSDGMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPILRTPSPMEKQASELYPRKIFMRFQEELVGTLTFMASNAEDDGEVITYHVAKFGEDHKAYYVKFNVLEMRATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEDHSTDVYTYYLESHTVRYNTLRHEALKFVDEGAKTLENYDVAMVALQEASKRVAEAIKNEGRTPISNGKVRSGLLNVGNHRDYTRGIHEESLIQHMSEDDMDKNIRELTNELQSANRKCEIYRSNLLSVLKAVEDHKSELSVTVQNIKISMKDGF 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0004 789 Coils Coil 732 759 - -
Acco03g0004 789 MobiDBLite consensus disorder prediction 1 53 - -
Acco03g0004 789 MobiDBLite consensus disorder prediction 19 33 - -
Acco03g0004 789 Pfam SWIM zinc finger 562 608 IPR007527 GO:0008270
Acco03g0004 789 Pfam FAR1 DNA-binding domain 82 173 IPR004330 -
Acco03g0004 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 688 IPR031052 GO:0006355
Acco03g0004 789 SMART 26again6 585 612 IPR006564 GO:0008270
Acco03g0004 789 ProSiteProfiles Zinc finger SWIM-type profile. 574 610 IPR007527 GO:0008270
Acco03g0004 789 Pfam MULE transposase domain 294 387 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0004 Acco-ChrAcco03 154785 159936 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco03g0004 MULE 3.3e-28 CL0219