Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3820 ATGGCTGAGAAGAAGTTGGGTGCAGGACGTATGGTGGCCGTGGCTATTGAGAATAACAAGACAAGCCAGTACGCTGCAAAATGGGCTGTTGATAATCTTGTTCCCAAAGATCAATGTATTCTTCTGATCCACGTCAGACAAAAGGCATCTTCCATTCCTACAACAACCGGAAATTTAGTACCCATTGATTCGGACGATGACGTGGCAAGAGCATACAAGCAACAAGTCGACAACGAATCCAGGGAGCTTTTTGCGTCATTCCGTGTTTTCTGCAATAGGAAAAGCGTACAATGCAAAGAAGTCTTATTGGAAGACACGGATATAGCTAAAGCATTGATAGAATGTGTTTCCGGGTATTCCGTTGAACTTATGGTACTTGGGGCACCATCAAGAAGTGGTATTGTGAGAAGATTTAGGACAAGCGATGTGCCAAGCCTCGTGTCAAAAGGTGCACCGCCATTCTGTACTGTGTACATCATTTCCAAAGGAAAAATCTCATCTGTACGAGCTGCTTCTGCTCCAGTGCCAGCCAAACCGACCCCTCGTAACGCATTGCAGCAACATTCTAACCAGAGTCCTGATAGGTTGGATGCAAAACTCGTCCGCAGCCTGACGCCACGTTCAGCAGAGCGGTCTGCCTACGGCACCTGCCCCCTATCGGCTGACGATGACATCAAGTCCCCATTCACAAGAGGTGCTAGATCAAGCTACAAACCTTACGAACCTTCAATCCCCGACTCTGATATATCATTTGTGAGCAGTGGAAAGCCCAGCACTGACAGGACCAAATATGCTGATCTCGAACCTGGAATGGAACCTCGGCTTTCCAACATTTCAGATTTTGATGGCACAAGCTCTTCTGACTCATCTTTCTCTGGGGCTAGGTCAATTGACATGAATTATTCTCAGGGTGATTTCTCATTTAGCTCACAAGAGAGTGGGGGGTCATCCACAAGATTGTCCCTAACGGATGATATGGAAGCCGAGATGAGAAGATTGAAGCTGGAACTGAAGCAAACGATGGAAATGTACAGTTCAGCTTGCAAGGAAGCTTTTACAGCACGGCAGAAGGCAATGGAACTGCAACGATGGAAATTAGAAGAGCAAAAGAAATTAGAAGAGGCAAGGGTGGCCGAAGAAGCAGCGCTGGCACTTGCAGAGAGAGAGAAGGCAAAGTGTAGAGCTGCCCTTGAGGCAGTAGAAGCAACTAAGAAAATTGCGGAACCGGAGGCACATAAAAGAATGAATACAGAGATGAAAGCCCTGAAAGAATGTGAGCAGAAAAAGAAGACACTAGACACTTTTTCACAAGGAAGTGCGAGGTACAGAAGATATAGTATTGAGGAAATTGAAGAAGCAACACAATGTTTTGCGGACTCGCTGAAGATCGGGGAAGGAGGGTATGGGCCAGTATATAGGTGTGAACTAGATCTCACGTCAGTTGCGGTAAAAGTTTTAAGGCCTGATGCATCGCAAGGAAGGTCACAGTTTCAGCAAGAGGTTGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTGCTGCTGGGAGCATGCCCAGAGTATGGGTGCCTAGTGTATGAGTACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGGAAACGTAACTCACCACCTCTTCCCTGGCAGTTGAGATTTCGAATAGCTGCAGAGATCGCCACCGGTCTCCTTTTCCTTCATCAGACAAAACCAGAGCCACTTGTTCACCGGGATTTAAAACCTGCCAACATCTTGCTTGATCGTAACTTCGTGAGCAAGATTAGTGACGTGGGACTGGCCAGGCTTGTGCCTCCTTCAGTGGCAGACAGTGTAACTCAGTACCTCATGACATCAACCGCTGGAACTTTCTGTTATATTGACCCAGAGTACCAGCAAACTGGCATGCTGGGAAGTAAGTCTGACATATACTCGCTGGGGATCATGCTTCTACAAATGATAACAGCAAAGCCCCCAATGGGTTTGACCCATCATGTTGGACGAGCAATCGAAAATGGCACTTTCAGGGAGATCCTTGACCCGGCTGTTGAACAGTGGCCAGTAGAGGAGACCCTACGGTTTGCCAAGCTCGCCCTGCAGTGTGCCGAAATGATGAGAAAAGACAGGCCTGATCTTAAAAAGGTTGTACTACCTCAGCTCAATTTACTAAGAGACTTTGCCGAAGATCACATGCCCATCATGATGATGTTTGGGCGTAGTACGCCTTTCGCTCCAGATGGGAGCAACCCTAGTTCCACCACCTCCACTGTTCAAGATTTTTTGAATGATTCTCAATCACTTTCTGGAATGTCCGGATACGAAAGCCTTTCAAGCACATCTTCCTTGTGCAGAATATGA 2358 0.4699 MAEKKLGAGRMVAVAIENNKTSQYAAKWAVDNLVPKDQCILLIHVRQKASSIPTTTGNLVPIDSDDDVARAYKQQVDNESRELFASFRVFCNRKSVQCKEVLLEDTDIAKALIECVSGYSVELMVLGAPSRSGIVRRFRTSDVPSLVSKGAPPFCTVYIISKGKISSVRAASAPVPAKPTPRNALQQHSNQSPDRLDAKLVRSLTPRSAERSAYGTCPLSADDDIKSPFTRGARSSYKPYEPSIPDSDISFVSSGKPSTDRTKYADLEPGMEPRLSNISDFDGTSSSDSSFSGARSIDMNYSQGDFSFSSQESGGSSTRLSLTDDMEAEMRRLKLELKQTMEMYSSACKEAFTARQKAMELQRWKLEEQKKLEEARVAEEAALALAEREKAKCRAALEAVEATKKIAEPEAHKRMNTEMKALKECEQKKKTLDTFSQGSARYRRYSIEEIEEATQCFADSLKIGEGGYGPVYRCELDLTSVAVKVLRPDASQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRNSPPLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYLMTSTAGTFCYIDPEYQQTGMLGSKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFREILDPAVEQWPVEETLRFAKLALQCAEMMRKDRPDLKKVVLPQLNLLRDFAEDHMPIMMMFGRSTPFAPDGSNPSSTTSTVQDFLNDSQSLSGMSGYESLSSTSSLCRI 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3820 785 FunFam U-box domain-containing protein 51 530 730 - -
Acco02g3820 785 Pfam Universal stress protein family 12 141 IPR006016 -
Acco02g3820 785 MobiDBLite consensus disorder prediction 278 294 - -
Acco02g3820 785 SUPERFAMILY Protein kinase-like (PK-like) 435 722 IPR011009 -
Acco02g3820 785 PANTHER OS02G0152300 PROTEIN 12 737 - -
Acco02g3820 785 SMART serkin_6 457 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3820 785 Coils Coil 323 343 - -
Acco02g3820 785 CDD STKc_IRAK 463 716 - -
Acco02g3820 785 Coils Coil 369 403 - -
Acco02g3820 785 Pfam Protein kinase domain 460 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3820 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 147 - -
Acco02g3820 785 MobiDBLite consensus disorder prediction 182 196 - -
Acco02g3820 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Acco02g3820 785 Gene3D Phosphorylase Kinase; domain 1 425 529 - -
Acco02g3820 785 Gene3D Transferase(Phosphotransferase) domain 1 530 732 - -
Acco02g3820 785 MobiDBLite consensus disorder prediction 228 294 - -
Acco02g3820 785 CDD STK_N 12 163 - -
Acco02g3820 785 ProSiteProfiles Protein kinase domain profile. 457 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3820 785 Gene3D HUPs 10 160 IPR014729 -
Acco02g3820 785 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 529 - -
Acco02g3820 785 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3820 Acco-ChrAcco02 53717211 53721631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3820 2 738 Receptor kinase-like Gene Family AT1G78940 53.716 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco02g3820 Pkinase 2e-40 CL0016