Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3802 ATGGCGAGGAAATGCTCGCATTGTGGAAACATAGGCCACAATTCAAGGACTTGCACTTCTTCCATCAGAGGTGCTTTTGTACGTCTTCGACTCTTTGGAGTTCAACTCGACATCTCTTCTTCCTCCTCTTCTTCTGCCATAAAGAAAAGCTTCAGCATGGACTCTTTACCCTCTTCTTCTTCATCCAGATTGACCATCGAAGAAATCTCCGACAGAACCTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGCCGAGTTCAAGACAAGAAAAAAGGAGTTGCATGGACAGAAGAGGAGCACCGAGCATTCCTGGGAGGGCTGGAGAAACTGGGAAAAGGAGACTGGAGGGGAATCTCAAGGAACTATGTCACCACCAGAACCCCTACTCAGGTGGCTAGCCATGCTCAGAAATACTTCCTCCGACTTGCCTCCCTTCACAAGAAGAAGCGACGCTCTAGTCTTTTCGATATGGTTGGAAGCAGCAGTGGAGGGCATCGCAATCATCCTAATATGGCAGGAGATTCATCAGGGGAGACCGATTTGCCGCTGCTTGGTCGAAATAAAATGGAAGCCAACAAAAAATCATCAGATGATAAGCAAATTATACAAGATCTTACGGATGATGATGATTCTCAAAAATCTTCCAATGCATCAGCACTTGATCTGGAGCTCACTCTTGCAGCCCCCAATAATAATAACACTCTCCATCAGCACCAGAATACCCTTCTAGGTCCGATCATCACCGTCACTTAG 753 0.4741 MARKCSHCGNIGHNSRTCTSSIRGAFVRLRLFGVQLDISSSSSSSAIKKSFSMDSLPSSSSSRLTIEEISDRTSLGYLSDGLLGRVQDKKKGVAWTEEEHRAFLGGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLASLHKKKRRSSLFDMVGSSSGGHRNHPNMAGDSSGETDLPLLGRNKMEANKKSSDDKQIIQDLTDDDDSQKSSNASALDLELTLAAPNNNNTLHQHQNTLLGPIITVT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3802 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Acco02g3802 250 Gene3D - 93 145 - -
Acco02g3802 250 CDD SANT 94 139 IPR001005 -
Acco02g3802 250 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Acco02g3802 250 MobiDBLite consensus disorder prediction 156 174 - -
Acco02g3802 250 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Acco02g3802 250 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Acco02g3802 250 MobiDBLite consensus disorder prediction 156 183 - -
Acco02g3802 250 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Acco02g3802 250 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Acco02g3802 250 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Acco02g3802 250 SMART sant 91 141 IPR001005 -
Acco02g3802 250 PANTHER TRANSCRIPTION FACTOR KUA1 3 216 - -
Acco02g3802 250 FunFam transcription factor MYB1R1 93 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3802 Acco-ChrAcco02 53474143 53475105 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco02g3802 Myb_DNA-binding 8.9e-11 CL0123