Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3800 ATGATCCCAAGTCATGGAGGTGGTGAAGAGAAGAAGGGTTCTTCAGATGTCGCCGGAAACGTGGTGGTGGTGGCGGTCAGAGCGTCGAAGGAGATTTCAAGGTCTGCTTTAGTGTGGGCTCTGACTCATGTGGTTCAACCCGGAGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCACTCCACAAGTAAAAGGATGTGGGTCCTTTCAAGATTTACCACTGATTGTACAACCAGTCAGTGGAGATCCCAAACTGCTTCAGATCAGAAGGAAATAATTGCCACTTCATGTTCAGAAATGATGCTTCAACTCCACGAATTTTATGATCCAGAAAAGATAAAGATCAGAATAAAGATTATTTCTGGTTCTTTATGTGGCGGAGTGGCTGCTGAAGCGAAGAGAGTTCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAACATGAAAAAAAATACTGCATGGAGGAGCTGTGTTGCAATATTGTAGTCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATCAGTTCACCAAAGGTGGAACTAGAAGGGGGTTTTCCACTGTCACCAGAGCTGAATGAATATCCACGAAACTTAAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGGTCACCATTGACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGGGATGTCACCATTTTTCCTCTCTGACACGTATGGGAGACAAAGGAGAGAAACCTTTGTTCATGATGAACTTAAAAATTTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGCTTATCATCTAGAAGTTCATATTTTGAGCCATGGGTTGCAAACGTAATGAGCACTGATGGAGAATTTTCAAAACACAGTGGTAGGACACATCGATCCAGTGATAAGTCTTTGGTGTCTGCCTATGAAACCTTGCTTCAGAAAGTCTCCAACTTGGATCAAGAACCGGGTATAGGATTTTTTCGTTGTAAACTTGATGTAAACTTGAGTAAAAGTGTTAGGGAGGCAATATCGCTGTCAAGGAATGCACCCCTTGGTCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGGGCCAGCATTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTTCACCTTGCCACAGGGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGTGGGTTTGGTTCTGTCCACTGCGGTGTCCTACCAGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCTAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTTGATGTCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTGAACGGATTTTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATATATCTGCAATGGGTCTTTAGATTCTCATCTTTATGGGCGAAACAAGAATGTGTTGGGATGGTCTGAAAGGCAAAAGATTGCAGTAGGGGCTGCTCGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGTATTGTGCACAGAGATATGAGGCCTAACAATATCCTCCTAACTCATGATTTTGAAGCTCTGGTGGGCGATTTTGGACTTGCTAGATGGCAACCTGATGGAGATATAGCTGTTGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATACGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCCTTTGGGGTAGTAATGCTGGAACTTGTCACTGGATGGAAGGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGCGCGGCCATTGCTTGAAAGAGATGCCATTCATGAACTGGTCGATCCAAGGTTGGAAAACTGCTATATAGATCAAGAGGTTCGTCGCATGATGTTATGTTGCTCAATGTGTCTACGGCAGGATCCTCATTTTAGGCCTAGAATGTCACAGGTGCTTCGGATGCTGGAAGATGACGACATTCCCATGTGA 2040 0.4377 MIPSHGGGEEKKGSSDVAGNVVVVAVRASKEISRSALVWALTHVVQPGDCIKLLVLIPAHSTSKRMWVLSRFTTDCTTSQWRSQTASDQKEIIATSCSEMMLQLHEFYDPEKIKIRIKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELCCNIVVMKGSQAKVLRLNLISSPKVELEGGFPLSPELNEYPRNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGMSPFFLSDTYGRQRRETFVHDELKNLEESESDSESEKLSLSSRSSYFEPWVANVMSTDGEFSKHSGRTHRSSDKSLVSAYETLLQKVSNLDQEPGIGFFRCKLDVNLSKSVREAISLSRNAPLGPPPLCSICQHKGPAFGNPPRWFTYAELHLATGGFSQANFLAEGGFGSVHCGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLNGFCVEDGRRLLVYEYICNGSLDSHLYGRNKNVLGWSERQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDIAVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVMLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIHELVDPRLENCYIDQEVRRMMLCCSMCLRQDPHFRPRMSQVLRMLEDDDIPM 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3800 679 MobiDBLite consensus disorder prediction 213 244 - -
Acco02g3800 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 679 - -
Acco02g3800 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Acco02g3800 679 MobiDBLite consensus disorder prediction 222 244 - -
Acco02g3800 679 Gene3D Phosphorylase Kinase; domain 1 376 477 - -
Acco02g3800 679 PANTHER OS01G0750732 PROTEIN 322 675 - -
Acco02g3800 679 Gene3D Transferase(Phosphotransferase) domain 1 478 677 - -
Acco02g3800 679 SUPERFAMILY Protein kinase-like (PK-like) 384 673 IPR011009 -
Acco02g3800 679 CDD STKc_IRAK 408 673 - -
Acco02g3800 679 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
Acco02g3800 679 ProSiteProfiles Protein kinase domain profile. 402 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3800 679 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3800 Acco-ChrAcco02 53445609 53451002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3800 361 668 Trihelix Transcription Factor Family AT1G68690 50.000 5.61e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco02g3800 PK_Tyr_Ser-Thr 1.2e-40 CL0016