Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3783 ATGGAAAACTCTTTCCCTTCTCACCCCATTCAACTCCCTCCCGGTTTCAGATTCCACCCCACCGATGAAGAACTCATCACCCACTACCTCTCCCCTAAACTCCTCGACCCTTCCTTCTCTCCTCTCGCCATCGCCCACGCTGATTTCAACAAGTCCGAGCCTTGGGATCTTCCCTGGAGGGCTCAAATGGGAGAGAAACAGTGGTATTTCTTCTGCGTCAGAGACCGGAAATACCCCACCGGTCTGAGAACCAATAGGGCCACCCATGCCGGCTACTGGAAAGCCACCGGCAAGGACAAGGAGATCTTCAAAGCTAAGACTCTGATCGGCATGAAGAAAACTCTGGTTTTCTACAGAGGCAGAGCCCCCAGAGGTGGAAAAACCAACTGGGTCATGCATGAATATAGACTCCACCCTCAACATCATCATGATCTCCCCTCTAAGGATGAGTGGGTTCTGTGCAGAGTATTTCAGAAGGTTGGTGGAGGGAAGAAGACGGTGGTGGAGGCTGGAGCTTGTTCTGAATTGCCTCCATTAATGGAGGGCTCGCCAAATCAAACAGAGTTTGGGGAGTCATCCCACGTGACCTGCTTCTCCGACCCGAATCGTCATCCAATGACCCGGGACGAGATAGTGGATAGCCAAGTACAGGTCCCAAATAGCTGTCAGCTGGAAAACTATGGATGGGGAGATTTGGATGGAGATATATCCTCTGTGATATATAACAGCAATGACATGATTCAGAGATCCTTTCACAATCAACCATACTCGTCATCTTCTGCTGGGCCCCTCATCGACGACATTGGTTGCCTCTGGAATTACTCCGCTTAG 831 0.5066 MENSFPSHPIQLPPGFRFHPTDEELITHYLSPKLLDPSFSPLAIAHADFNKSEPWDLPWRAQMGEKQWYFFCVRDRKYPTGLRTNRATHAGYWKATGKDKEIFKAKTLIGMKKTLVFYRGRAPRGGKTNWVMHEYRLHPQHHHDLPSKDEWVLCRVFQKVGGGKKTVVEAGACSELPPLMEGSPNQTEFGESSHVTCFSDPNRHPMTRDEIVDSQVQVPNSCQLENYGWGDLDGDISSVIYNSNDMIQRSFHNQPYSSSSAGPLIDDIGCLWNYSA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3783 276 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Acco02g3783 276 FunFam NAC domain-containing protein 100-like 21 163 - -
Acco02g3783 276 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
Acco02g3783 276 Gene3D NAC domain 21 161 IPR036093 GO:0003677|GO:0006355
Acco02g3783 276 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Acco02g3783 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3783 Acco-ChrAcco02 53310387 53311390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3783 10 200 NAC Transcription Factor Family AT5G39610 66.169 9.59e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g3783 NAM 2.7e-38 No_clan