Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g3782 | ATGGGTCGATCACCATGCTGTGACAAGGTGGGTTTAAAGAAAGGACCGTGGACTCCTGAGGAAGATCAGAAACTTCTTGCTTATATTGAAGAACAAGGGCATGGAAGCTGGAGAGCCTTGCCAGTAAAAGCTGGCCTCCAGAGGTGTGGCAAGAGCTGCAGACTGAGGTGGACCAATTATCTTAGGCCTGATATTAAAAGAGGAAAGTTCAGTTTACAAGAAGAGCAAACCATCATCCAACTCCATGCTCTCCTAGGAAACAGGTTTTGTAACCTTAACCCTTACGAACTTATCTATATTTGCCGGCTTGCTTTATTTCCTTGTTATGTATGGGTACATGTTATGCTTTATTGTCTTGTGCTCAGGTGGTCAGCTATAGCCACGCACTTGCCAAAGAGAACAGACAATGAGATCAAGAACTACTGGAATACTCATCTCAAGAAAAGATTAACCAAAATGGGAATTGACCCTGTCACCCACAAACCCAAGAATGATGCCCTTGTGCCCCGCGGTGACGGAGGCCTGTCCAAGACGGCGGCCAACCTTAGCCACATGGCTCAATGGGAGAGTGCTCGACTTGAAGCTGAAGCAAGGTTGGCTAGAGAATCCAAACTACTACGTTCATCACTATCACTTACATCTTCATCTTCATCATCTCATAATCCAGTTCTCATCAAGACTTGGAGTAGTAGTAATAATAATAATTGTGGCGGGTGGCTAAAATCCACAGATCAAAGCATTAAAAATGGCGGCGGCGGCGGCCTTGAATCTCCAAAGTCTACTCTTACTCTCTCTGAGAACACCCCACCACCTATTATGCCTATGATTGAGTTTGTGGGCACTTCTGGTTCTTGTGAGGCAGCAGAAATGATGAAACAGCGAGAGGGGAATCATAGTAATGGTTTGGACAATAGTTCAATGTCTTATGCTGCGTCCAGCCTGCATCATGAGCTGATCATTTCCAACATGGAAGGAACTTGGACCTCTCAGGAGCCTCTTCTTAGGATTGGCACTGGTGGCGATGATGTTGCTGAGGATCAGGGGTTCGCCAATCTGTTGCTCAATACAAACTCCAACGACCGGAGCTTGTCGGAGGAGGATGGCGGAGGAGACTCTCACGATTTGGATGGTGGAGGAGGTGGTGGGGGCAGTGGCATCTTGTGTGAAGATCATAGTAAGAACTACTGGGACAGCATTCTTAATTTAGTTAACTCTAATTCCCCTTCTCATTCCCCGATGTTTTGA | 1245 | 0.4627 | MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEQGHGSWRALPVKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRFCNLNPYELIYICRLALFPCYVWVHVMLYCLVLRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALVPRGDGGLSKTAANLSHMAQWESARLEAEARLARESKLLRSSLSLTSSSSSSHNPVLIKTWSSSNNNNCGGWLKSTDQSIKNGGGGGLESPKSTLTLSENTPPPIMPMIEFVGTSGSCEAAEMMKQREGNHSNGLDNSSMSYAASSLHHELIISNMEGTWTSQEPLLRIGTGGDDVAEDQGFANLLLNTNSNDRSLSEEDGGGDSHDLDGGGGGGGSGILCEDHSKNYWDSILNLVNSNSPSHSPMF | 414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g3782 | 414 | Gene3D | - | 69 | 150 | - | - | |
| Acco02g3782 | 414 | MobiDBLite | consensus disorder prediction | 358 | 386 | - | - | |
| Acco02g3782 | 414 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Acco02g3782 | 414 | Pfam | Myb-like DNA-binding domain | 67 | 146 | IPR001005 | - | |
| Acco02g3782 | 414 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Acco02g3782 | 414 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Acco02g3782 | 414 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 65 | IPR017930 | - | |
| Acco02g3782 | 414 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 122 | 150 | IPR017930 | - | |
| Acco02g3782 | 414 | FunFam | MYB-related transcription factor | 13 | 66 | - | - | |
| Acco02g3782 | 414 | MobiDBLite | consensus disorder prediction | 247 | 270 | - | - | |
| Acco02g3782 | 414 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 289 | - | - | |
| Acco02g3782 | 414 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Acco02g3782 | 414 | SMART | sant | 66 | 148 | IPR001005 | - | |
| Acco02g3782 | 414 | ProSiteProfiles | Myb-like domain profile. | 62 | 146 | IPR001005 | - | |
| Acco02g3782 | 414 | Gene3D | - | 13 | 66 | - | - | |
| Acco02g3782 | 414 | MobiDBLite | consensus disorder prediction | 247 | 268 | - | - | |
| Acco02g3782 | 414 | CDD | SANT | 69 | 146 | IPR001005 | - | |
| Acco02g3782 | 414 | SUPERFAMILY | Homeodomain-like | 15 | 89 | IPR009057 | - | |
| Acco02g3782 | 414 | SUPERFAMILY | Homeodomain-like | 121 | 155 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g3782 | Acco-ChrAcco02 | 53292244 | 53295236 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g3782 | 1 | 414 | MYB Transcription Factor Family | AT3G01140 | 49.880 | 3.74e-107 | 318 |
Transcription factors information