Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3776 ATGCGAATACGACTGTGGGGAAAGAAACCAGATAATGGTTATACTCCTCAGCTCAGCGTTGACCTATATAGTGGGAGACGAAAATTTAAAGAAACGAAATCAAATAGCTGCGACAATGGTTTTCTTCTTCTTCTTCTTCGACTTTTAAGTTGGAACAATGTGAGGGAAAGAGTTGAAGCTTTGATGTTTGGAACAGGACAAGGAAATGATCCTCTCAAGATCATTTGGGCTGGTAGTCGGCCACAACAAGCAAAACCAACATATAGGGTCCTTCACTTATCCATCAATCTCAGGCTTGAGACCTGTCGCATCGTTTCGTGTTCGATTTCGTGTCTGCATATCTATTATTGGTTGATTCCCCTCCGCGACTCGCCAGTCGCCAATTTGAGAATGGATGGTTCAACTGGCCGTGGCAGCAGTGCTGATGTATATTTACCAAATTATAAGATGGGGAAAACACTTGGGATTGGATCCTTTGGCAAAGTGAAAATTGCAGAGCATGTATTGACTGGCCATAAAGTTGCCATTAAGATTCTTAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGACTGTTCATGCACCCACACATTATAAGACTTTATGAGGTCATAGAAACCCCAACGGACATATATGTTGTTATGGAGTATGTTAAATCCGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTGCAAGAGGATGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGTGTGGAATACTGTCACAGAAACATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTACTTTTGGACTCCAAATGCAATGTGAAAATTGCTGATTTTGGTTTGAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCCGCTCCAGAGGTTATATCCGGAAAATTGTATGCCGGGCCTGAAGTAGATGTCTGGAGCTGTGGTGTTATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATTTATACACTTCCTAGTCATCTATCACCTGGTGCGAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGAATGACCATACCTGAGATTCGCCAACACCCATGGTTCCAAGCTCACCTCCCTCGCTATTTAGCTGTGCCTCCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAACTCCTTCAGGAAGTGGTTAACATGGGATTTGATAGGAATCAACTCGTTGAATCCCTCCAGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTATTAGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACGATGGATTCTGGTTTCAACCGAGTTACTGCTCCTGCTGTTGGTCACCACCTTCCAGGGTTTATGGATTATCCAGGAGCAGCATTAAGATCCCAGATCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAATCTCGTGCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGCAATCCTGGTCATGACAGAATGGTAGATAATAATTTGTATGGTAGTCATTACTTCAGAGATGATGCCACCATCATTGAGAACGACTCTGTTTCTAAGTCAAATGTGGTCAAGTTTGAACTTCAGCTTTACAAAACTAGGGAGGAGAAATATCTGCTTGATCTGCAAAGGGTCCTGGGCCCACAGTTTCTGTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGTGTCCTCTAG 1914 0.4232 MRIRLWGKKPDNGYTPQLSVDLYSGRRKFKETKSNSCDNGFLLLLLRLLSWNNVRERVEALMFGTGQGNDPLKIIWAGSRPQQAKPTYRVLHLSINLRLETCRIVSCSISCLHIYYWLIPLRDSPVANLRMDGSTGRGSSADVYLPNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRVTAPAVGHHLPGFMDYPGAALRSQIPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDRMVDNNLYGSHYFRDDATIIENDSVSKSNVVKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3776 637 SUPERFAMILY KA1-like 457 636 IPR028375 -
Acco02g3776 637 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Acco02g3776 637 Pfam UBA/TS-N domain 422 458 IPR015940 -
Acco02g3776 637 SUPERFAMILY Protein kinase-like (PK-like) 145 419 IPR011009 -
Acco02g3776 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Acco02g3776 637 SMART serkin_6 148 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3776 637 SUPERFAMILY UBA-like 410 459 IPR009060 GO:0005515
Acco02g3776 637 CDD AMPKA_C 513 634 - -
Acco02g3776 637 Gene3D Kinase associated domain 1, KA1 519 635 - -
Acco02g3776 637 SMART uba_6 423 460 IPR015940 -
Acco02g3776 637 ProSiteProfiles Protein kinase domain profile. 148 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3776 637 FunFam Non-specific serine/threonine protein kinase 519 635 - -
Acco02g3776 637 Gene3D Transferase(Phosphotransferase) domain 1 139 477 - -
Acco02g3776 637 CDD STKc_AMPK_alpha 145 400 - -
Acco02g3776 637 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 588 636 IPR001772 -
Acco02g3776 637 CDD UBA_SnRK1_plant 422 462 - -
Acco02g3776 637 FunFam Non-specific serine/threonine protein kinase 139 478 - -
Acco02g3776 637 Pfam Kinase associated domain 1 594 636 IPR001772 -
Acco02g3776 637 FunFam Non-specific serine/threonine protein kinase 137 227 - -
Acco02g3776 637 Pfam Protein kinase domain 148 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3776 637 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 421 461 IPR015940 -
Acco02g3776 637 PANTHER SERINE/THREONINE KINASE 147 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3776 Acco-ChrAcco02 53221903 53233530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3776 148 400 CBL-interacting serine-threonine protein kinases AT4G24400 52.362 1.01e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Acco02g3776 Pkinase 5.6e-80 CL0016